| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001081 |
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| Symbol | |
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| ID | 8559394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 1230707 |
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| End bp | 1231891 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646408752 |
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| Product | multidrug resistance protein D |
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| Protein accession | YP_003288231 |
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| Protein GI | 262396378 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCGCC CAATCAACTT TCGCACTATC TTACTCGCCT GTCTTATTAT CAGTGTTGGC
CAATTGAGCA TGGGGCTTGT TATGCCCTCT TTGCCATGGA TCGCAAAAGA CTTTTCTATC
TCCCTTGATC AAACCCAACT GCTCGTGAGT ATTTACTTAC TCGGTTTTGG TCCCTCTCAG
TTCATTTACG GTCCGGTATC GGATGCTTTG GGTCGAAAAA AAGTGCTGCT GACGGGCTTG
CTCATCGCGA TGTCTGGTCT ATTAATGATC ATTTTCCTCA GTGACACCTT CACAGGCATG
GTGATGGGGC GTTTTCTACA AGGCTTAGGA ACTGGGTGCT GCGCGGTACT CGCGAGAGCA
TCGACTCGAG ATAGATTTAG CGGTGATGAG CTCCCTGTCG CCATGTCTTA TATCGCTATG
GCAGCTTCGA TCACGCCACT CATTGCGCCT GTGATTGGCG GCTTTATCAA CTTCCACTTT
GGTTGGAGTA TGGTGTTCAT TTCACTGCTA GGTTATGTCT CACTCGCTTG GGTAATCATC
GCCTTTAAGT TTACAGAAAC CATAGCAAAA CGATCTGTTA TTCCGTCACC ACGCAACATG
CTTTTCCAGT ATCGAGACTT GGTGACGTCA CGTTACTTTA TGAGTTTTGC CAGCATCAGT
TGGTTAAACT TCAGCCTGAT GATAACGACC GTGTCCGTGA TGCCATTTAT CATGCAAGAC
CAAATTGGCA TGACATCCGA TCAATACGCA ATGTGGGCAC TCATTCCCGC TTTAGGTATG
TTAGGCGGCA CCACGATTTG TAACCGAGTA AGGCCAATTA TCGGCAACAA AAGAATGCTA
CTTTGTAGTC CATTCTTGCA TCTCAGTGCT GCAATATGGT TGTTCTTCTG CCCGGTAGAA
CCACTGTATT TAATGTTGGG GCAACTATTA ATGATCTTAG GTAACGGCAT TGCCCTACCT
TGCGCGCAAG CCATGGTAAT GCAACCCTAC AAAAAGCAGG CTGGTGCTGC AGCAGCCATG
TCTGGAGGTG GACAAATGAT CGTATCCTCA TTGGTCAGCT TAACATTGGT ACAGCTTGGT
TTAAGCCAAG CCTGGCATCT ATCAATCGTT ATTGTGGTGT TTGCAGCAAT AACGCTCACC
AATATTCAAC GAGGTTTTGG AGCAGAGCAA CCTTCAGAAC AGTAA
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| Protein sequence | MSRPINFRTI LLACLIISVG QLSMGLVMPS LPWIAKDFSI SLDQTQLLVS IYLLGFGPSQ
FIYGPVSDAL GRKKVLLTGL LIAMSGLLMI IFLSDTFTGM VMGRFLQGLG TGCCAVLARA
STRDRFSGDE LPVAMSYIAM AASITPLIAP VIGGFINFHF GWSMVFISLL GYVSLAWVII
AFKFTETIAK RSVIPSPRNM LFQYRDLVTS RYFMSFASIS WLNFSLMITT VSVMPFIMQD
QIGMTSDQYA MWALIPALGM LGGTTICNRV RPIIGNKRML LCSPFLHLSA AIWLFFCPVE
PLYLMLGQLL MILGNGIALP CAQAMVMQPY KKQAGAAAAM SGGGQMIVSS LVSLTLVQLG
LSQAWHLSIV IVVFAAITLT NIQRGFGAEQ PSEQ
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