Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001049 |
Symbol | |
ID | 8559362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 1186245 |
End bp | 1188755 |
Gene Length | 2511 bp |
Protein Length | 836 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 646408720 |
Product | ABC-type antimicrobial peptide transport system permease component |
Protein accession | YP_003288199 |
Protein GI | 262396346 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCAAG CTAGGCTCTC AAACACCAGA TTCACACATA CTCGACTCGC ACTGAATCTG TTTGCAGCGC ACTATCGGCA GGCGCCACTG CAAGCCGCCG CAATTCTGAT CGGTATCGTG CTGGCAGTGA CCTTGTTTGT TGCGGTGCAA GCCATCAACC TCAATGCCAA GCGCAGTTAT GCAGAGTCTA CCGAGCAGCT TAGCGCACAA GCTCAGAACT TAATTATTCC ACCAGCAGGG CAAAACTATC TGCCCGAATC GCTCTACTTC ACCCTTAGAC AAAATGGGCT CAGTGCAACA CTACCTGTGA TCGAGGGGCG AGTGAGAGAT GAACAAGGGC GACGTTGGTC GGTGCAAGGT AGCGAGTTGA TTGCCGCAAT TTCCTCACGT TCGCGCTACT TATCAGATAA TGAGCAGAAC GTGTCTTTGT TCGACAGTGC TTTACCTTTG CCAGAGCTTT TAGCTGGCAA GCCAATCGTG ATGATGAGCC AATCTCAACA TCAAAATCTA GGAGAGGTGG ACACCCTAAC TCTGGACGAT ATCCCAACCC AAGTGGTGGT GCTACCTGAC GAATGGCAGT TAGGTAGCCG AATGTTGCTG GACATTGGCT TTGCCCAGCA ACTGCTCAAT AAACAAGGAC AGCTCAGTTA CATTGCAGTT TTCCATTCGG GTGATAAAGG GAATAAAGAC AAGCAAACAA AATGGCAAAG CATCATTGGT GAGCAAGGAC AATGGATTTC CAATAATCAA AGTACAGACC TTGGTTCGCT GACCGACAGC TTTCACCTCA ATCTCACAGC AATGAGCTTA CTTGCCTTTT TAGTCGGGCT GTTCATTGCC TACAACGGCG TAAAATACAG TTTGCTGAAA CGCAATCGTC TGTTAGTACA AATCCAACAG GCAGGTGTTG CGCCGAGCAT TGTGTTCTCT GCGCTGTTAG TTGAACTCTC TCTTCTCGTT ACCATCGGTG CTTCCCTCGG TTTTGTATTG GGCATGCAGC TCAGCCATTG GTTGCATCCG ACCGTAGCAC TGACTCTAGA ACAACTTTAT GGTGCGACAC TGCTGCCCGG CACTTGGCAA TGGCAATGGT GGGCGCAAGC CCTGCTGCTC ACATTAGCCG CAACCATATT GGCATGTTGG CAGCATTTTA AACAGCGAGT GCGCCAGCCG CTTTCCTCTC ATGGCGGATT TTATCAAGCA CCTGAAGCCT CTAACGAAAA CCAATTGTTC TTGATAGGTG CTGCGTTGAC GGCTCTCGCA CTTGCAGGGT TATGGCGGAG TGAGCATCAT CGCTTTACCA TGGCGTGGCT CGGCGTGCTT GTGGTGTCGA TTCCTTTGTA TCTACCTAAA ACACTCAGCG TCTTAGCCAA TTGGTGTGAA AAGCGCACCA CTTCCGGTTT GATGCAGTAT CTGTTTGCTG AGCTGCGCGA GCTGATTTCT CCGCTTTCTC TCGCCATGAT GGCACTGCTA CTCGCTGTTA CAGCCAATAT GGGGATGAAC ACCTTAGTGG GCAGCTTTGA ATCCACCCTA AAACAGTGGT TAGAACAAAG GTTGCACGCC GATATTTACG TCAGCCCTGC CCAAGGGGAA ATCGCAGATG TAGAGCGCGC ATTAGGACAG TTCGACAATG TTGAGACCGT CTACAAGCAA TACTACGTCG ACGATAACCT GCAAGGCTTA CCGATTTTAC TTGGCACCAA AGACAAAGAC ACCTTAGAGC AAACCATGGT GTTCAAATCG CATTTGGAGA ACTTCTGGTC ACGTTTTTAC CAAGGTGAAT TAGTCGCCAT CAGTGAACCA ACCGCGGTCA AACTGGGTTT ATCACTGGGT AGCGAGCTCA CACTTGATGC TGTTCCAAAT AAGAACCTGC TTGTGGGGGC GATATTTCAC GATTACGGTT CACCCAATGG TGAAGTGTTA TTGGCACCCA AATTATGGCA AGAGAGTGGC TTTACCGACC TGCCAACAAG CCTTGGCATT AAAGTATCTG GTGACCCACA AATCGTATAC GACCAACTGC GCGAGCAATT GAATCTGCAT CCAAGTCAGC TCTACGATCA GGCGCAAATC AAATCCATCG CGTTGGATAT TTTCTCACAG ACCTTCGCCA TTACGCGGGC ACTCAACGGC GTGACCTTGA TGGTCGCGGT GATTGGTTTG TTCAGTGCTT GCTTCATGTT GCTCGATGCG CGCAAAGCCG CCATTGCAAG GCTGTATGCA CTTGGCGTCA ACCGTCGTAA ATTAATGACC ATGGTGGTTG GACAGATCGT CGCTTTGGTC AGTTTTACTC TGGTGATTGC CCTGCCCCTC GGTGCTATGG TGGGCTATGT GCTGACAGAC ATAGTCACCT TGCGCGCTTT TGGTTGGAGC TTAAATTATC TATGGAATTG GAGCGATGCC CTCAGTATTG CGGCGATCAC CATCTTGGTG GCGGTGATTG CAACCTTGAT TCCGCTGTGG CGATTGGTCA GTAAGCCTGT CGTGTCCAGT TTGCAAAGCG AGGTGTTGTG A
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Protein sequence | MKQARLSNTR FTHTRLALNL FAAHYRQAPL QAAAILIGIV LAVTLFVAVQ AINLNAKRSY AESTEQLSAQ AQNLIIPPAG QNYLPESLYF TLRQNGLSAT LPVIEGRVRD EQGRRWSVQG SELIAAISSR SRYLSDNEQN VSLFDSALPL PELLAGKPIV MMSQSQHQNL GEVDTLTLDD IPTQVVVLPD EWQLGSRMLL DIGFAQQLLN KQGQLSYIAV FHSGDKGNKD KQTKWQSIIG EQGQWISNNQ STDLGSLTDS FHLNLTAMSL LAFLVGLFIA YNGVKYSLLK RNRLLVQIQQ AGVAPSIVFS ALLVELSLLV TIGASLGFVL GMQLSHWLHP TVALTLEQLY GATLLPGTWQ WQWWAQALLL TLAATILACW QHFKQRVRQP LSSHGGFYQA PEASNENQLF LIGAALTALA LAGLWRSEHH RFTMAWLGVL VVSIPLYLPK TLSVLANWCE KRTTSGLMQY LFAELRELIS PLSLAMMALL LAVTANMGMN TLVGSFESTL KQWLEQRLHA DIYVSPAQGE IADVERALGQ FDNVETVYKQ YYVDDNLQGL PILLGTKDKD TLEQTMVFKS HLENFWSRFY QGELVAISEP TAVKLGLSLG SELTLDAVPN KNLLVGAIFH DYGSPNGEVL LAPKLWQESG FTDLPTSLGI KVSGDPQIVY DQLREQLNLH PSQLYDQAQI KSIALDIFSQ TFAITRALNG VTLMVAVIGL FSACFMLLDA RKAAIARLYA LGVNRRKLMT MVVGQIVALV SFTLVIALPL GAMVGYVLTD IVTLRAFGWS LNYLWNWSDA LSIAAITILV AVIATLIPLW RLVSKPVVSS LQSEVL
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