Gene VEA_001049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001049 
Symbol 
ID8559362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1186245 
End bp1188755 
Gene Length2511 bp 
Protein Length836 aa 
Translation table11 
GC content50% 
IMG OID646408720 
ProductABC-type antimicrobial peptide transport system permease component 
Protein accessionYP_003288199 
Protein GI262396346 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCAAG CTAGGCTCTC AAACACCAGA TTCACACATA CTCGACTCGC ACTGAATCTG 
TTTGCAGCGC ACTATCGGCA GGCGCCACTG CAAGCCGCCG CAATTCTGAT CGGTATCGTG
CTGGCAGTGA CCTTGTTTGT TGCGGTGCAA GCCATCAACC TCAATGCCAA GCGCAGTTAT
GCAGAGTCTA CCGAGCAGCT TAGCGCACAA GCTCAGAACT TAATTATTCC ACCAGCAGGG
CAAAACTATC TGCCCGAATC GCTCTACTTC ACCCTTAGAC AAAATGGGCT CAGTGCAACA
CTACCTGTGA TCGAGGGGCG AGTGAGAGAT GAACAAGGGC GACGTTGGTC GGTGCAAGGT
AGCGAGTTGA TTGCCGCAAT TTCCTCACGT TCGCGCTACT TATCAGATAA TGAGCAGAAC
GTGTCTTTGT TCGACAGTGC TTTACCTTTG CCAGAGCTTT TAGCTGGCAA GCCAATCGTG
ATGATGAGCC AATCTCAACA TCAAAATCTA GGAGAGGTGG ACACCCTAAC TCTGGACGAT
ATCCCAACCC AAGTGGTGGT GCTACCTGAC GAATGGCAGT TAGGTAGCCG AATGTTGCTG
GACATTGGCT TTGCCCAGCA ACTGCTCAAT AAACAAGGAC AGCTCAGTTA CATTGCAGTT
TTCCATTCGG GTGATAAAGG GAATAAAGAC AAGCAAACAA AATGGCAAAG CATCATTGGT
GAGCAAGGAC AATGGATTTC CAATAATCAA AGTACAGACC TTGGTTCGCT GACCGACAGC
TTTCACCTCA ATCTCACAGC AATGAGCTTA CTTGCCTTTT TAGTCGGGCT GTTCATTGCC
TACAACGGCG TAAAATACAG TTTGCTGAAA CGCAATCGTC TGTTAGTACA AATCCAACAG
GCAGGTGTTG CGCCGAGCAT TGTGTTCTCT GCGCTGTTAG TTGAACTCTC TCTTCTCGTT
ACCATCGGTG CTTCCCTCGG TTTTGTATTG GGCATGCAGC TCAGCCATTG GTTGCATCCG
ACCGTAGCAC TGACTCTAGA ACAACTTTAT GGTGCGACAC TGCTGCCCGG CACTTGGCAA
TGGCAATGGT GGGCGCAAGC CCTGCTGCTC ACATTAGCCG CAACCATATT GGCATGTTGG
CAGCATTTTA AACAGCGAGT GCGCCAGCCG CTTTCCTCTC ATGGCGGATT TTATCAAGCA
CCTGAAGCCT CTAACGAAAA CCAATTGTTC TTGATAGGTG CTGCGTTGAC GGCTCTCGCA
CTTGCAGGGT TATGGCGGAG TGAGCATCAT CGCTTTACCA TGGCGTGGCT CGGCGTGCTT
GTGGTGTCGA TTCCTTTGTA TCTACCTAAA ACACTCAGCG TCTTAGCCAA TTGGTGTGAA
AAGCGCACCA CTTCCGGTTT GATGCAGTAT CTGTTTGCTG AGCTGCGCGA GCTGATTTCT
CCGCTTTCTC TCGCCATGAT GGCACTGCTA CTCGCTGTTA CAGCCAATAT GGGGATGAAC
ACCTTAGTGG GCAGCTTTGA ATCCACCCTA AAACAGTGGT TAGAACAAAG GTTGCACGCC
GATATTTACG TCAGCCCTGC CCAAGGGGAA ATCGCAGATG TAGAGCGCGC ATTAGGACAG
TTCGACAATG TTGAGACCGT CTACAAGCAA TACTACGTCG ACGATAACCT GCAAGGCTTA
CCGATTTTAC TTGGCACCAA AGACAAAGAC ACCTTAGAGC AAACCATGGT GTTCAAATCG
CATTTGGAGA ACTTCTGGTC ACGTTTTTAC CAAGGTGAAT TAGTCGCCAT CAGTGAACCA
ACCGCGGTCA AACTGGGTTT ATCACTGGGT AGCGAGCTCA CACTTGATGC TGTTCCAAAT
AAGAACCTGC TTGTGGGGGC GATATTTCAC GATTACGGTT CACCCAATGG TGAAGTGTTA
TTGGCACCCA AATTATGGCA AGAGAGTGGC TTTACCGACC TGCCAACAAG CCTTGGCATT
AAAGTATCTG GTGACCCACA AATCGTATAC GACCAACTGC GCGAGCAATT GAATCTGCAT
CCAAGTCAGC TCTACGATCA GGCGCAAATC AAATCCATCG CGTTGGATAT TTTCTCACAG
ACCTTCGCCA TTACGCGGGC ACTCAACGGC GTGACCTTGA TGGTCGCGGT GATTGGTTTG
TTCAGTGCTT GCTTCATGTT GCTCGATGCG CGCAAAGCCG CCATTGCAAG GCTGTATGCA
CTTGGCGTCA ACCGTCGTAA ATTAATGACC ATGGTGGTTG GACAGATCGT CGCTTTGGTC
AGTTTTACTC TGGTGATTGC CCTGCCCCTC GGTGCTATGG TGGGCTATGT GCTGACAGAC
ATAGTCACCT TGCGCGCTTT TGGTTGGAGC TTAAATTATC TATGGAATTG GAGCGATGCC
CTCAGTATTG CGGCGATCAC CATCTTGGTG GCGGTGATTG CAACCTTGAT TCCGCTGTGG
CGATTGGTCA GTAAGCCTGT CGTGTCCAGT TTGCAAAGCG AGGTGTTGTG A
 
Protein sequence
MKQARLSNTR FTHTRLALNL FAAHYRQAPL QAAAILIGIV LAVTLFVAVQ AINLNAKRSY 
AESTEQLSAQ AQNLIIPPAG QNYLPESLYF TLRQNGLSAT LPVIEGRVRD EQGRRWSVQG
SELIAAISSR SRYLSDNEQN VSLFDSALPL PELLAGKPIV MMSQSQHQNL GEVDTLTLDD
IPTQVVVLPD EWQLGSRMLL DIGFAQQLLN KQGQLSYIAV FHSGDKGNKD KQTKWQSIIG
EQGQWISNNQ STDLGSLTDS FHLNLTAMSL LAFLVGLFIA YNGVKYSLLK RNRLLVQIQQ
AGVAPSIVFS ALLVELSLLV TIGASLGFVL GMQLSHWLHP TVALTLEQLY GATLLPGTWQ
WQWWAQALLL TLAATILACW QHFKQRVRQP LSSHGGFYQA PEASNENQLF LIGAALTALA
LAGLWRSEHH RFTMAWLGVL VVSIPLYLPK TLSVLANWCE KRTTSGLMQY LFAELRELIS
PLSLAMMALL LAVTANMGMN TLVGSFESTL KQWLEQRLHA DIYVSPAQGE IADVERALGQ
FDNVETVYKQ YYVDDNLQGL PILLGTKDKD TLEQTMVFKS HLENFWSRFY QGELVAISEP
TAVKLGLSLG SELTLDAVPN KNLLVGAIFH DYGSPNGEVL LAPKLWQESG FTDLPTSLGI
KVSGDPQIVY DQLREQLNLH PSQLYDQAQI KSIALDIFSQ TFAITRALNG VTLMVAVIGL
FSACFMLLDA RKAAIARLYA LGVNRRKLMT MVVGQIVALV SFTLVIALPL GAMVGYVLTD
IVTLRAFGWS LNYLWNWSDA LSIAAITILV AVIATLIPLW RLVSKPVVSS LQSEVL