| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001029 |
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| Symbol | |
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| ID | 8559342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 1168912 |
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| End bp | 1169835 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646408700 |
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| Product | transcriptional regulator |
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| Protein accession | YP_003288179 |
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| Protein GI | 262396326 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAGAGG TACCGTCAAA CACTTCGTCA ACCCTGGCCA GTGCAATAGA AAAGCTTGCC
AAGCACATTG AGAAATGGGC AAATGGCGCG AACCAATATG ACACAGAAAT TCCAGGATTA
AGGTTCAGTC GTTGGGCAAC CCCAACACCA CCGACAAGCT ACACCCACAA CCCAAGTATT
TGCTTAATTG CTCAAGGGAG AAAGCGCGTG TTGTTGGGTG AAGATAGCTT TGTTTACGAT
GCGAACCACT TTTTAATCTC CTCTGTCGAC TTGCCGATTA TCGCCAATAT CATTGAAGCC
AGTGAAGATA AACCTTATTT AGGGGTGATT ATGGAGCTGG ATCTGACTGA AATATCTCAA
CTTATTGTCG ATAGTGAGCT GACGTTTAAT CAAAGCAAAG AAGCACAAAA AGGCATAGCG
GTTGGAGAGT TGTCGGAGCC ATTACTTGAC GCCTTTCTGC GTTTAATAGA GCTGCTGGAT
GAAGGACAAA GCATCAAAAT TTTAGCGCCG ATTATTAAAC GAGAGATTTT TTATCGACTG
TTAATCACCG AACAGGGCGC TCGTCTTAAT CAAATCGTAA CTGCAGGAAG TCACAGCCAT
CAAATCGCGA AGGCCATTGA TTGGTTGAAG AATAATTTCG TAAAGCCGTT AAGTGTCAGT
GAGTTAGCCG CCTACAGTGG CATGAGTAAA TCGGCGTTTT ATACCCACTT TCGTTCTATG
ACATCTATGA CGCCACTGCA ATTTCAAAAG AAATTAAGAC TCAGCGAAGC TCGGCGTTTA
ATGCTTACAG AAAACCTCGA TGCCATGGCG ACTACGTTTA AAGTGGGTTA CGAAAGCCCT
TCTCAATTTA GCCGTGAATA CAGCCGTTTA TTTGGTGCGC CACCATCCAA AGACATCAAG
TCTTTGCGCG AGAGTATGGG TTAA
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| Protein sequence | MQEVPSNTSS TLASAIEKLA KHIEKWANGA NQYDTEIPGL RFSRWATPTP PTSYTHNPSI
CLIAQGRKRV LLGEDSFVYD ANHFLISSVD LPIIANIIEA SEDKPYLGVI MELDLTEISQ
LIVDSELTFN QSKEAQKGIA VGELSEPLLD AFLRLIELLD EGQSIKILAP IIKREIFYRL
LITEQGARLN QIVTAGSHSH QIAKAIDWLK NNFVKPLSVS ELAAYSGMSK SAFYTHFRSM
TSMTPLQFQK KLRLSEARRL MLTENLDAMA TTFKVGYESP SQFSREYSRL FGAPPSKDIK
SLRESMG
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