| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001019 |
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| Symbol | |
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| ID | 8559332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1159515 |
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| End bp | 1161008 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646408690 |
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| Product | proline/sodium symporter PutP |
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| Protein accession | YP_003288169 |
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| Protein GI | 262396316 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.858432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAGAAA ATAGCTTTGC TATCACGTCC ACTTTTGTGG CGTATTTACT GATTATGGTT
GCTATTGGCG TTTACGCGTA TAAGAGGACT TCCAATTCAT CTGATTACTT CCTAGGTGGC
CGTAGCCTAG GTCCGTGGCC TGCTGCATTA TCTGCAGGTG CTTCAGACAT GAGTGGTTGG
TTGCTGCTAG GCTTGCCTGG CTATGCGTAC GCTGCGGGTA TCGAGGCCTT CTGGTTAGCC
GGCGGTCTAC TTCTTGGTAC ATGGGCAAAC TGGCTCATCA GTGCAAAACG CCTACGTACC
TACAGTATCC AAACTGACGC GTTAACGTTG CCAGAGTTCC TGTCACGTCG CTTCAACGAT
AAGTCGAAAC TGATCCAGAC AATCTCTGCG TTTTTCATTC TTCTATTTTT CCTTTTCTAC
ACCAGCTCAG GTTTGGTCGC AGGGGGCAAA CTGTTTGAGA CGGTATTCGG TCTAGATTAC
ACCTACGCTG TTATCATCGG TACGGTGTGT GTGGTTTCTT ACACACTATT CGGTGGTTTC
CTTGCGGTAT CTTGGACTGA CTTAGTGCAA GGCTTGCTAA TGGCGGCTGC GCTAATGATT
GTTCCTGTTG CAGTAATGGA CGGTGGTCTA GGTCAGCTAA CTTCTGATCT GCATGACATC
AACCCAGAAC TTGCAACGCT ATGGAATGAC GCCAAAGGCG AACCACTGTC TGCGATTGCG
ATCATCTCTT TAGCGGCATG GGGTCTTGGT TACTTTGGCC AGCCACACAT CCTAGCGCGT
TTTAAAGCGT CTCGTTCAAA CAAAGATCTA ACGACTGCAC GTCGTATCGC TGTGATTTGG
ACTGCACTAT CTATGGTTGG TGCAATGCTT GTTGGTCTTG TTGGTCTGGT TTGGGTTACG
GGTCATCCGG GTACTCAACT AGAAGACGGC GAGAAGATCT TCATGCTATT GGTTAACGCA
GTATTCCACC CTGTCGTTGC GGGTATGTTG TTAGCAGCAA TCCTAGCGGC GGTAATGAGT
ACAGCAGACT CACAGCTTCT TGTTTCATCT TCAGCGCTTG CAGAAGATTT CTACAAGCAA
GTATTCAAGC CAGAAGCGTC TTCAGAAGAA ATCGTAATGA TTGGCCGTAT CGGCGTTATC
GTTATTTCGC TTGTTGCGCT ATTCCTAGCA ATGACACCAG ATAGTTCAGT ACTTGGTCTT
GTTTCTTACG CTTGGGCTGG CTTCGGTGCT GCATTTGGTC CTGCGGTTGT ACTTAGCCTT
TACTGGAGCG GTATGAACCG TAACGGCGCA CTAGCAGGTA TCCTTGTTGG TGGTATCACT
ATCGTAGTTT GGAAGCAGCT AACTGGCGGT TGGTTTGATG TGTACGAAAT CGTACCGGGC
ATCATCTTCT CTACGCTTGC TATCGTTGTT ATCAGCAAAG CGACAGGCGG TGCAGCGCAA
GACGTATTAG ACCAACATCA ATCGTACGAG AAGAAACTAG TTGAACTAGA CTAA
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| Protein sequence | MIENSFAITS TFVAYLLIMV AIGVYAYKRT SNSSDYFLGG RSLGPWPAAL SAGASDMSGW
LLLGLPGYAY AAGIEAFWLA GGLLLGTWAN WLISAKRLRT YSIQTDALTL PEFLSRRFND
KSKLIQTISA FFILLFFLFY TSSGLVAGGK LFETVFGLDY TYAVIIGTVC VVSYTLFGGF
LAVSWTDLVQ GLLMAAALMI VPVAVMDGGL GQLTSDLHDI NPELATLWND AKGEPLSAIA
IISLAAWGLG YFGQPHILAR FKASRSNKDL TTARRIAVIW TALSMVGAML VGLVGLVWVT
GHPGTQLEDG EKIFMLLVNA VFHPVVAGML LAAILAAVMS TADSQLLVSS SALAEDFYKQ
VFKPEASSEE IVMIGRIGVI VISLVALFLA MTPDSSVLGL VSYAWAGFGA AFGPAVVLSL
YWSGMNRNGA LAGILVGGIT IVVWKQLTGG WFDVYEIVPG IIFSTLAIVV ISKATGGAAQ
DVLDQHQSYE KKLVELD
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