| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001017 |
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| Symbol | |
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| ID | 8559330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1155528 |
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| End bp | 1158659 |
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| Gene Length | 3132 bp |
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| Protein Length | 1043 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646408688 |
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| Product | proline dehydrogenase (Proline oxidase)/delta-1-pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_003288167 |
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| Protein GI | 262396314 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
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| TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.135188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTACAG CTACGAACGT GTTGACACCG GAATTTATCG GGCAGCCGCT TGATAAGTTG
TGGTCACTGA TCTCGCCATT GTATATGGTG GACGAGTCTC AATGGCTAGA GCAACTATTG
CCACTAGCGA CGCCGACAGA GGATGAAAAA TCGGCGATCA CTACCCAAAC GACCCAACTT
ATCGAAGCCA TTCGTGCCGA TAAGAAGTCA ATCCAGATGA TTGATGCTCT ATTGTTGGAA
TACAGCTTAG ATACTCAAGA AGGTATCTTG CTGATGTGTC TTGCAGAAGC ATTAATGCGC
ATCCCAGATG CCGCGACAGC AGATTCTTTG ATTAAAGATA AGTTGAGCGT CGCAGACTGG
AAATCTCACC TGAAAAACTC TGACTCTGTG TTTGTTAACG CATCAACATG GGGCCTCATG
CTAACAGGTA AAGTGGTTGG TCTTGGTGAG CAAGGCACCC AGAGCCCAGG TCAGGCTGTA
AACCGTCTGG TAAATAAATT CTCTGAGCCT GTGATTCGTA AAGCCATGTA TCAGGCAATG
AAGATTATGG GTCACCAGTT TGTTCGTGGT CGTACGATAG AAGAAGCGCA AAAGAACGGT
CGCCCAATGC GCGACAAAGG TTTCACCTAC TCATTTGATA TGTTAGGTGA GGCGGCGTTA
ACTACAGCGG ACGCGAACAA GTACTTCAAA GATTACCTAA TGGCGATCGA AGCGGTAGGT
CGAGAGACTT ACGGCAATGA CACCAGTCCT GCGCCTTCGA TTTCCATCAA GCTTTCTGCA
TTACATCCGC GCTACGAAGT CGCAAATGAA GAACGTGTAA TGACAGAGTT GTATGACTCA
CTAATGCAAC TACTAAAACG TGCTATTGAA GTCGACGTTG CAATCACAAT CGATGCAGAA
GAAGCGGATC GCCTTGAGCT TTCTCTGAAG CTATTTGAGA AAGTGTACCG TAGCGATCTT
GTGAAAGGTT GGGGCAAGTT TGGTTTGGTT ATTCAAGCCT ACTCAAAACG TGCTCTACCA
GTCTTGGTGT GGCTAAACGC ACTCGCAAAA GAGCAGGGTG ACCTTATTCC GCTGCGTTTG
GTTAAAGGCG CGTACTGGGA CAGCGAAATC AAGTGGTCTC AACAAGCGGG TTACGCTAAT
TACCCGGTAT ACACTCGCAA AGAAGCGACG GACGTTGCGT ACCTAGCTTG TGCTCGTTTC
CTACTTAGCG AAGGTGTTCG CGGTAATATC TACCCGCAAT TTGCAAGCCA CAATGCCCAC
ACGGTGACGG CAATCGCCGT TATGGCTGAG CACAAAGAGT ACGAGTTCCA GCGTCTGCAT
GGTATGGGTG ATTCACTGTA TAACCATGTT ATGGAAATGT ATGGTCAGCC AGTACGTATT
TACGCTCCTG TCGGTAGCCA TGCTGATCTT CTTCCGTACT TGGTTCGTCG TCTGCTGGAA
AATGGCGCAA ACAGCTCGTT TGTACACCGT CTGGTTGATG CGCGTTGTCC GATTTACGAG
TTGACTCATC ACCCTGTTGA TGTGTTGACG GGTTTTGACA CGCTACACAA CGACAAGATC
CCATTACCTG CCGACATCTT CCCTGAGCGT AAGAACTCAT ACGGCGTCAA CATTGATATC
GACAGTGAGG CGAAGCCATT TGAAGCGCAG GTAGAAAGCT TCATGGACAA TCAGTGGGTT
GCAGGCCCGA TGATCAATGG TGAGCGTTTC GCCGAAAGCA TGATCAAGGA AAATGCGGCT
GAGATCATCA CCGCACCGTA CGATCGCCGA ATTGAAGTCG GCAAGGTGGC ATTTGCAACA
CTTGATCATG TTTCCGCTGC AATTGATGCG GCGCAAACTG CTTTCTCTGA TTGGAAAGGT
GTTCCTGTTG AGCAAAAAGC GGCTTGTTTA GAAAAGCTTG CTGACTTAAT GGAAGAAAAT
CTGGCTGAGC TGGTGGCGAT TTGTCACAAA GAAGCGGGCA AGACGATTCA CGATAGTATT
GATGAAGTTC GTGAAGCAGT GGATTTCTGT CGTTATTACG CGAAACAAGC GCAAAACCTA
CAGCCATTTG AGCTAGAGGG TTTCGATGGT GTGAAACGCA TTTCTAGCCG TGAAGGTCTT
GGTGTGTTTG TGTGTATCAG CCCTTGGAAC TTCCCTCTGG CTATCTTCCT TGGTCAGGTA
ACGGCAGCAC TGATTGCGGG TAACACTGTG GTTGCAAAAC CTGCAGAGCA AACAAGCTTA
ATCGCCGCTC GCGCTATTGA ATTAATGCTT GATGCTGGCT TCCCTGCTGG TGTGATTCAG
TTACTTACTG GTCGCGGCGC TGAGATTGGT CATGCACTGA CTTCTCATGA TGCTATTGCT
GGTGTGGCAT TCACTGGTTC AACGGCAACT GCGCAACGCA TTAACGTCAC GCTTGCGGAG
CGCAGCGCGA AACCGGTTCC GTTTATTGCG GAAACAGGTG GTCAAAACGC AATGATCGTG
GACAGTACTG CATTGCCAGA GCAGGTGGTG CGTGATGTGA TTCGTTCGGC GTTTGCATCT
GCCGGTCAGC GTTGTTCTGC CCTTCGTGTT CTATTTGTAC AAGAAGATGT AGCAGACCGT
ATGATCAACC TGATTCAAGG TGCGATGAAT GAGCTGCATG TTGGTTTACC TTACCTACAC
AAAACGGATG TTGGTCCGGT TATCGACAGC AATGCAAAAC AAAAACTCCT TGCTCACCTT
GAGCAAATGA GCAAAACACA GACTAAAGTC GCTCAGCTAC AGCTGGATGA ATCGTGCCAG
CATGGTGACT TTGTCTCACC AAGTGCGTTT GAAATCTCGG GCATCGATGT GCTGAAAGAA
GAACAATTTG GTCCAATCTT GCACATTGTT CGCTTTAAAG CCTCTGAATT ACCGAACGTG
GTTGCGCAGA TCAACAAGAC GGGTTTTGGC TTGACGATGG GTATCCATAG CCGTAACGAA
ACCACGTACC GTTGGATTGA GAAACACGCT CGAGTGGGTA ACTGCTACAT CAACCGAGAC
CAAGTTGGTG CTGTGGTTGG CGTACAGCCG TTTGGTGGTC AAGGCTTGTC GGGTACTGGC
CCGAAAGCTG GTGGTCCACA CTACCTATTC CGCTTTACTC AACATCTTCT TGCTCAAGCA
GAAAACGCAT AA
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| Protein sequence | MFTATNVLTP EFIGQPLDKL WSLISPLYMV DESQWLEQLL PLATPTEDEK SAITTQTTQL
IEAIRADKKS IQMIDALLLE YSLDTQEGIL LMCLAEALMR IPDAATADSL IKDKLSVADW
KSHLKNSDSV FVNASTWGLM LTGKVVGLGE QGTQSPGQAV NRLVNKFSEP VIRKAMYQAM
KIMGHQFVRG RTIEEAQKNG RPMRDKGFTY SFDMLGEAAL TTADANKYFK DYLMAIEAVG
RETYGNDTSP APSISIKLSA LHPRYEVANE ERVMTELYDS LMQLLKRAIE VDVAITIDAE
EADRLELSLK LFEKVYRSDL VKGWGKFGLV IQAYSKRALP VLVWLNALAK EQGDLIPLRL
VKGAYWDSEI KWSQQAGYAN YPVYTRKEAT DVAYLACARF LLSEGVRGNI YPQFASHNAH
TVTAIAVMAE HKEYEFQRLH GMGDSLYNHV MEMYGQPVRI YAPVGSHADL LPYLVRRLLE
NGANSSFVHR LVDARCPIYE LTHHPVDVLT GFDTLHNDKI PLPADIFPER KNSYGVNIDI
DSEAKPFEAQ VESFMDNQWV AGPMINGERF AESMIKENAA EIITAPYDRR IEVGKVAFAT
LDHVSAAIDA AQTAFSDWKG VPVEQKAACL EKLADLMEEN LAELVAICHK EAGKTIHDSI
DEVREAVDFC RYYAKQAQNL QPFELEGFDG VKRISSREGL GVFVCISPWN FPLAIFLGQV
TAALIAGNTV VAKPAEQTSL IAARAIELML DAGFPAGVIQ LLTGRGAEIG HALTSHDAIA
GVAFTGSTAT AQRINVTLAE RSAKPVPFIA ETGGQNAMIV DSTALPEQVV RDVIRSAFAS
AGQRCSALRV LFVQEDVADR MINLIQGAMN ELHVGLPYLH KTDVGPVIDS NAKQKLLAHL
EQMSKTQTKV AQLQLDESCQ HGDFVSPSAF EISGIDVLKE EQFGPILHIV RFKASELPNV
VAQINKTGFG LTMGIHSRNE TTYRWIEKHA RVGNCYINRD QVGAVVGVQP FGGQGLSGTG
PKAGGPHYLF RFTQHLLAQA ENA
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