| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001008 |
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| Symbol | |
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| ID | 8559321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 1142287 |
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| End bp | 1144401 |
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| Gene Length | 2115 bp |
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| Protein Length | 704 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646408679 |
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| Product | ABC transporter transmembrane region |
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| Protein accession | YP_003288158 |
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| Protein GI | 262396305 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGACC CTTTACTGAA TTCGCTCATC TATGTTAGCC GTTACTATGG GTTAGCTAAC
TCGCCAGAAG CGCTGGTCAA TGGCCTTCCG CTTTCAGACG GCAAGCTAAC TCCATTTTTG
CTACCAAGAG CAGCGGAAAG GGCCGGATTG GTTGCCAAGG AAAACCGTGC AGAGCTGGAG
AACATCTCCA GCCTGATTCT GCCGGCAATC TTAGTTCTTA AAGGCGGTGA CTCATGCGTT
CTCAACAGCA TTAACGCGGA GACACGCGAA GCCGAAGTCA CCACCTTAGA AAGTGGAATG
GTGCCAATCT CCATTCCATT AGAAGACCTA CTTGAGCAGT ACACTGGTCG CTACTTTTTA
GTTAAAAAGC AATTCCGTTT CGATGAGCGC TCTCCCGAGG TGCTCAAAAC CAACGAAGGT
CACTGGTTTT GGTCAACCTT GTGGCAGTCA AAACGTATCT ACCGCGATGT TTTAATCGCC
TCACTTCTCA TCAACCTCTT TGCCGTTGCC GCCCCGCTGT TCACTCGCTT GGTGTACGAC
AAAGTGGTAC CGAATCTCGC GTTTGAAACC TTATGGGTAT TGGCAAGCGG CATCTTTGTT
GTCTTTCTAT TCGATTTCAT ACTCAAATCG TTGAGAAACT ACTTTATTGA TGTCGCAGGA
AAGAAGTCTG ACATTCTGAT TTCCTCCAAG CTGTTCAGCA AAGTGATGGG CATCCGAATG
GAGTCCAAGC CGCCTTCAGT CGGCGCATTC GCTCGCCATC TTCAAGAGTT TGAATCTATT
CGAGAATTCT TCACGTCTGC AACCGTCAGT GCCCTAATTG ACCTGCCTTT TGCCATTCTG
TTCTTGGTGA TTATATGGCT AATGGCTGGC GATCTTGTGT ATGTTCCAAT GGTCGGCGTG
GTCATTTTGA TTGTTCATTC ACTACTGATT CAAGGACCGC TGCGTCGCTC TATAGAGGAA
GGGTCACGCT TAGCATCGCA AAAATACGCC AACTTAATTG AGAGTCTAGC GGGGCTAGAA
ACCGTAAAAA TGCTCAGCGC GCAAAGCCAA TTCCAATACC GTTGGGAAGA AGCGGTGGCG
CACATGGCGA ACTGGAATAT CAAAAGCCGC CGCATTACCG ACAGCATCCA GAACGCGGCT
GGCTTCGTGC AGCAAAGTAG TAACGTTGGG ATGATCATTC TCGGTGTTTA TCTGATTGCA
GAAGGCGAAC TCACCATGGG TGGCTTAATT GCCGCAACCA TGTTGAGTGG TCGCGCCATA
GGGCCTTTGG TTCAGTTGTC TTTGCTCTCA ACGCGCTACA ACCAGGCGAA GTCTTCTATG
ACGATTATCA ATCAAGTCAT GGAAATGCCG GACGAGCAAG AAGAAGGGAA ACGCTATATC
CATCGCCCAA TCATCCAAGG TAAGATTGAA ATTGATCGCG TAACGTTTCA TTACCCAGAC
TCTCCTGTCG CGTCTATACG TAACATTTCT CTCACGATAA ATCCTGGTGA AAAAGTCGCG
ATAATCGGTC GGATTGGTTC GGGTAAGACA ACGTTAGAGC GCTTGATTAT GGGCTTGTAT
AAGCCAACAG AGGGGCACGT ACGTATCGAT GATACTGATA TTGCACAGCT TCACCACGTT
GATGTTCGAC GTAACATCGG CTGTGTGCCT CAAGATTCGA ATCTATTCTT CGGTTCGATT
CGCGACAATA TTACCTTGGG TCGTCCACTA ACCGATGACC GAGACGTGCT TGATGCAGCA
AACCGTGCAG GCGTGACCGC ATTTACACAA TCGGATCCAG CAGGTTTAGA ACGTCAAGTA
GGTGAAGGTG GTGCGATGCT TTCTGGTGGT CAACGTCAAG CCGTCACGAT CGCTCGTGCA
TTTTTGGGCC GTCCTCCCGT CCTACTTATG GATGAACCAA CCAGCGCGAT GGATAACCGC
TCTGAAATGC ATATTAAGCA CCAGCTATCT CAGCTCAAAC CGAGCGAAAC ATTGATACTG
ATTACGCATA AAACGTCGAT GCTCGACATC GTTGATCGAG TAATTGTGAT GGAGAAAGGC
AGCATCATTG CTGATGGTCC TAAAGCGCAA GTGCTGAATG ACCTGAAGCA AGGCAAAGTA
CGTGCGGTTA GCTAA
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| Protein sequence | MKDPLLNSLI YVSRYYGLAN SPEALVNGLP LSDGKLTPFL LPRAAERAGL VAKENRAELE
NISSLILPAI LVLKGGDSCV LNSINAETRE AEVTTLESGM VPISIPLEDL LEQYTGRYFL
VKKQFRFDER SPEVLKTNEG HWFWSTLWQS KRIYRDVLIA SLLINLFAVA APLFTRLVYD
KVVPNLAFET LWVLASGIFV VFLFDFILKS LRNYFIDVAG KKSDILISSK LFSKVMGIRM
ESKPPSVGAF ARHLQEFESI REFFTSATVS ALIDLPFAIL FLVIIWLMAG DLVYVPMVGV
VILIVHSLLI QGPLRRSIEE GSRLASQKYA NLIESLAGLE TVKMLSAQSQ FQYRWEEAVA
HMANWNIKSR RITDSIQNAA GFVQQSSNVG MIILGVYLIA EGELTMGGLI AATMLSGRAI
GPLVQLSLLS TRYNQAKSSM TIINQVMEMP DEQEEGKRYI HRPIIQGKIE IDRVTFHYPD
SPVASIRNIS LTINPGEKVA IIGRIGSGKT TLERLIMGLY KPTEGHVRID DTDIAQLHHV
DVRRNIGCVP QDSNLFFGSI RDNITLGRPL TDDRDVLDAA NRAGVTAFTQ SDPAGLERQV
GEGGAMLSGG QRQAVTIARA FLGRPPVLLM DEPTSAMDNR SEMHIKHQLS QLKPSETLIL
ITHKTSMLDI VDRVIVMEKG SIIADGPKAQ VLNDLKQGKV RAVS
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