| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001003 |
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| Symbol | |
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| ID | 8559316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 1137189 |
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| End bp | 1137899 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646408674 |
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| Product | gamma-D-Glutamyl-meso-Diaminopimelate Amidase |
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| Protein accession | YP_003288153 |
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| Protein GI | 262396300 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2866] Predicted carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTCTAA TTCCAAGAAC GGAAAGAGCG GCATTTTTAA TTCGACCAAC ATCATACGGT
CAATCCGTGC TTGGTGCGCC ATTACTGTAT TTTCCGGCTC AAGTCGAAAG TGCTTCGCGA
GGTTTGATTT TGGCAGGCAC TCACGGGGAT GAGACGGCCT CGATTACAGG TTTGTCCTGC
GCGCTAAGAA GCTTGCCTGC TGAAAACTTA CGACATGATG TGATTCTGTC AATGAATCCT
GACGGCAACC AGCTAGGCAC ACGTGCAAAT GCAAACCAAG TGGATCTCAA TCGCGCGTTT
CCAACCCAAA ATTGGACTGA GCATGGCACC GTGTATCGAT GGAGCTCTCA CACACCCGTT
CGAGACGTAA AGGTGAAAAC TGGCACTAAA AACCAACTAG AGCCTGAAGT TAGCGCATTA
ATTAACTTGA TTGAACTGCG CAAGCCAAAG TTTGTGGTGT CGTTTCATGA ACCGCTTGCG
TTTGTGGATG ATCCCAAACA TTCCGACCTT GCCAAATGGC TCAGCGAGCA GTTCCAACTG
CCAATCGTAG ACGATGTCGA CTACGAAACA CCCGGCTCAT TCGGCACTTG GTGTAGTGAA
CGTGATTTAC CTTGCATCAC GTTGGAATTG CCCGCGATTT CTGCCGATCT CACCATTGAA
AAGCATCTGT CCGCCTTTAT TGCTTTGCTG AGGCACGATC CGGATCTTTA G
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| Protein sequence | MSLIPRTERA AFLIRPTSYG QSVLGAPLLY FPAQVESASR GLILAGTHGD ETASITGLSC
ALRSLPAENL RHDVILSMNP DGNQLGTRAN ANQVDLNRAF PTQNWTEHGT VYRWSSHTPV
RDVKVKTGTK NQLEPEVSAL INLIELRKPK FVVSFHEPLA FVDDPKHSDL AKWLSEQFQL
PIVDDVDYET PGSFGTWCSE RDLPCITLEL PAISADLTIE KHLSAFIALL RHDPDL
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