Gene VEA_000958 details

Gene Information

• Locus tag: VEA_000958
• ID: 8559271
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013457
• Strand: +
• Start bp: 1089219
• End bp: 1089914
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 646408629
• Product: pirin-related protein
• Protein accession: YP_003288108
• Protein GI: 262396255
• COG category: [R] General function prediction only
• COG ID: [COG1741] Pirin-related protein

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000774517
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTACGG TAAGACATGC AGCAGACCGA GGTCGAGCAA ACTTTGGCTG GCTTGATAGC 
AAACATACGT TTTCTTTCGG TAGCTATTAC GATCCACAAC ATATGGGCTT TTCTGAGCTG 
AGAGTCATCA ATGACGATGT AGTCCAACCT GGCGCAGGTT TTGATACACA TGGCCATCGT 
GATATGGAGA TCATCAGCTA TGTGCTGGAA GGTGTTATCG CGCACAAAGA CAGCGAAGGT 
AACGTGAAAA CATTACCCGC CGGGGAATTC CAACTCATGT CGGCAGGGAA AGGGATTTAC 
CACAGTGAGT ACAATGCGTC GAACCAAGAT ACGCTGCGCT TTCTACAGAT TTGGATTCAG 
CCAAATACAT TTGGAACCAA ACCAGGTTAT CAGCAAAAAG ACTTTGGTCG CACGCCTGGA 
TTAACAACCA TCGCGACTCC AACAGGAGAA AACGGTACGC TACTTATTAA GCAAGATGCC 
ACATTACATC AGTTAATTCT TGAACCAAAT AGCGAACTTA ACTTTGAGAT AGAATCGGGT 
AGAAACTTAT TCGTTCACCA AGTAACGGGA AGCCTTAGCA TCGACAATAC CACCTTGACG 
GCGGGCGACG GCGCGAAGGT CGAACAGCAA AGTAAGGTTG TTTTACGCAA TACATCAAAC 
GAGAGCACAA CCGCCCTGCT ATTTGACTTG CCATAA 

 

Protein sequence

MITVRHAADR GRANFGWLDS KHTFSFGSYY DPQHMGFSEL RVINDDVVQP GAGFDTHGHR 
DMEIISYVLE GVIAHKDSEG NVKTLPAGEF QLMSAGKGIY HSEYNASNQD TLRFLQIWIQ 
PNTFGTKPGY QQKDFGRTPG LTTIATPTGE NGTLLIKQDA TLHQLILEPN SELNFEIESG 
RNLFVHQVTG SLSIDNTTLT AGDGAKVEQQ SKVVLRNTSN ESTTALLFDL P