Gene VEA_000925 details

Gene Information

• Locus tag: VEA_000925
• ID: 8559238
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013457
• Strand: +
• Start bp: 1057110
• End bp: 1058978
• Gene Length: 1869 bp
• Protein Length: 622 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 646408596
• Product: Signal transduction protein
• Protein accession: YP_003288075
• Protein GI: 262396222
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.334534
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCACAT CCGTCACTCC AAACATCTTC GACTTTTTAA TCAAAATTGA CCCCTTTGAT 
AAACTGCCAG AACCTGTGGT TGAAAGCATC GCGAATTCCG TCAAGGTCAA GTATCTCGTG 
AGGGGCGAAA CCATCGGTTT TAGCGCCTTG TGCGATCAAC GTTACCTCTA CATCATCCGA 
ACCGGTGCCA TTGAACAGCG CACGCCTAAC GGCGAACTGC GTGCGCGCCT TGGGCAAGAT 
GACCAATTTG GTTTTACTTT CCTCGACCCA CTCGAAAATG CCGAAGATGG TTACCAAGCG 
GAAGCGATTG AAGATTCATT GCTCTATTTG ATCCCCCATT CTGAGCTAAA ACTGGTCAGC 
GAAGAACACC CAGAATTTGC CGACTATTTT GCCGCCCAGG CCAATGTGCG CTTGAGTTCT 
GCGGTGAAGT ACGTTTGTCG GAAAGAAGAA AAAGGGCTGT TCTTTCGTAC TGTTGGCGAG 
ATCGCCAGCG AAAACATTGC GATTGTCGAT GTGAACGACT CTATCCGCAG TGTGGCGCAA 
ACCATGTGCG GCAAACAACG CAGCTCCTGT GCCGTTGTGA TGAAAGAAGG CGAAATTATT 
GGCTTAGTCA CCGACCGAGA TATGACGAAA TCGGTCGTCG CGCAAGACAT GGATACCAAT 
CAGCCCATTG CCGACGTGAT GACGCCAAAC CCTGTGTTGA TCGAAGACGA TGCTAAAGTG 
ATTCAAGCCA TTTCCTTGAT GCTGCAGTAC AACATTCGCT GTTTGCCCGT GGTACATGGC 
AAGCAAGTGA AAGGACTTCT AACGACAACA CATTTAGTGC ATAACCACCG CACGCAGTCT 
TTGTTCTTAA TTGAGAAAAT CAAATACGCG AGTTCACTCA ACGCGCTGGC GGCTTTGAAA 
GAAGAACGTC AAACCATTTT CCAAGCGTTG GTGGAAAGCG GTGTGAGTGC GGAAATTCAG 
GGTCGGGTGA TGTCGATGAT CATGGACGCT TTCACGCGCC GCATCATCCA GCTCAATGAA 
GAACTGTTGG GCCCACCGCC ATGTGATTAC GCGTGGTTGG TTGCAGGCTC TCACGCCCGT 
AACGAAGTGC ACATGCTGTC GGACCAAGAC AGTGCGATTG TGCTTTCCGA TGACGCCACC 
GAAGAACATA AACTGTACTT CACTCACCTT GCCATGCGGG TGTGTAATGG TTTAGCGGCG 
TGCGGTTATC CGCTTTGTGA CGGCAAGTAC ATGGCAGCGT CACCAAAGTG GTGTCAGCCA 
ATTCGTCGTT GGAAAGAGTA CTATCAGAAA TGGGTGGCCA GCCCAGAATA CAACAAATTA 
TTGAGCATTA GCGTATTCCT TGAAGTGCGT GCCATTCACG GCAACCGCGA GTTTGTCGAC 
CAAATCCAAC AACACTTGCA TGATTGTATT CAAAAGAGCC CGAGCTTTAT TCCGGCTTTG 
GTGCGAGACG CGATTGACAC TCAGCCGCCA CTTGGCATTT TCAACAATTT GGTGTTGGAA 
AAAGGTGGGG AAAACAGCAA CACGTTAAAC ATCAAAAAGT ACGCCTTGAA TCTGATCATC 
GATCTGGCGC GTATTTTCAG TCTTGCTGCT GGCGGCTCGT TAACTGGCAC AGAAGAGCGT 
TTTCGCTACG CAGCCCAGCA CGGCACATTG TCGAAAGACA GTGTTGAAAA CATCATTGGC 
GCGTATCGCT TTATTACTCA GGTACGTTTC CGTCATCAAC TCAATGCGAT TCTGGCAGGC 
ACCACACCTG ACAACCACAT CGCACCCGAT GATTTCAGTA GCTTTGAGCG CAAGCACTTA 
AAAGATGCAT TTAAGATCAT CAGTGAGCTG CAAGATGTCG CGAAACTGAA GTTTGTGAAA 
GGGGCGTAA 

 

Protein sequence

MGTSVTPNIF DFLIKIDPFD KLPEPVVESI ANSVKVKYLV RGETIGFSAL CDQRYLYIIR 
TGAIEQRTPN GELRARLGQD DQFGFTFLDP LENAEDGYQA EAIEDSLLYL IPHSELKLVS 
EEHPEFADYF AAQANVRLSS AVKYVCRKEE KGLFFRTVGE IASENIAIVD VNDSIRSVAQ 
TMCGKQRSSC AVVMKEGEII GLVTDRDMTK SVVAQDMDTN QPIADVMTPN PVLIEDDAKV 
IQAISLMLQY NIRCLPVVHG KQVKGLLTTT HLVHNHRTQS LFLIEKIKYA SSLNALAALK 
EERQTIFQAL VESGVSAEIQ GRVMSMIMDA FTRRIIQLNE ELLGPPPCDY AWLVAGSHAR 
NEVHMLSDQD SAIVLSDDAT EEHKLYFTHL AMRVCNGLAA CGYPLCDGKY MAASPKWCQP 
IRRWKEYYQK WVASPEYNKL LSISVFLEVR AIHGNREFVD QIQQHLHDCI QKSPSFIPAL 
VRDAIDTQPP LGIFNNLVLE KGGENSNTLN IKKYALNLII DLARIFSLAA GGSLTGTEER 
FRYAAQHGTL SKDSVENIIG AYRFITQVRF RHQLNAILAG TTPDNHIAPD DFSSFERKHL 
KDAFKIISEL QDVAKLKFVK GA