| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000917 |
|---|
| Symbol | |
|---|
| ID | 8559230 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | - |
|---|
| Start bp | 1051019 |
|---|
| End bp | 1051642 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 646408588 |
|---|
| Product | 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate aldolase |
|---|
| Protein accession | YP_003288067 |
|---|
| Protein GI | 262396214 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
|---|
| TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGATC TGAACCAACA ACTTTCAGAA ATTAAAGTAG TCCCTGTTAT CGCGATCAAA
GACGCAGGCA AGGCAGTGAA ATTGGCACAG GTGCTGATTG AAAATGGCCT GCCATGTGCT
GAAGTGACGT TCCGTACTGA GGATGCCGCT TTAGCGATCA AAAACATGCG CGAAGCGTAC
CCAGAGATGT TGATTGGCGC GGGAACTGTG CTGACAAGCG CGCAAGTGGA TGAAGCGATT
GATGCGGGCG TGGACTTTAT TGTGAGCCCA GGTTTCAACC CAACTACAGT GAAATACTGC
CAACAGCGTA ACGTGACCAT CGTCCCTGGT GTCAACAACC CAAGCTTGGT TGAACAAGCA
ATGGAAATGG GTCTGCGTAC GCTGAAGTTT TTCCCAGCAG AACCGTCAGG CGGCGTCGCG
ATGCTAAAAG CATTATCTGC GGTTTATCCT GTAAAATTCA TGCCAACCGG TGGCGTGAGC
CCAAGCAATG TTAAAGATTA CTTGTCTATT TCTTCAGTCT TAGCGTGTGG TGGTACTTGG
ATGGTACCCG GCGATTTGAT TGACAACGAG CAATGGGATG AACTGGCGAA GCTGGTTCGT
GAAGTTGCGG GAATTATCGA ATAA
|
|---|
| Protein sequence | MKDLNQQLSE IKVVPVIAIK DAGKAVKLAQ VLIENGLPCA EVTFRTEDAA LAIKNMREAY
PEMLIGAGTV LTSAQVDEAI DAGVDFIVSP GFNPTTVKYC QQRNVTIVPG VNNPSLVEQA
MEMGLRTLKF FPAEPSGGVA MLKALSAVYP VKFMPTGGVS PSNVKDYLSI SSVLACGGTW
MVPGDLIDNE QWDELAKLVR EVAGIIE
|
|---|
| |