| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000913 |
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| Symbol | |
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| ID | 8559226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 1043972 |
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| End bp | 1045744 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646408585 |
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| Product | sodium-solute symporter putative |
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| Protein accession | YP_003288064 |
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| Protein GI | 262396211 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATACG ATTACTTAGT AATAGCAGGC TACTTTGCCC TGATGGTGGC AATCAGCTTG
CTGTTCAAAA AAATGGCAAG CAATAGTACC AGCGACTATT TCCGCGGGGG CGGTAAGATG
CTTTGGTGGA TGGTTGGTGC CACAGCATTT ATGACTCAGT TCTCTGCATG GACGTTTACC
GGTGCAGCGG GTAAAGCGTT TAACGATGGC TTCGCGGTAT TGGCCGTGTT TGTTGGCAAC
ATGGTGGCGT ACGTTTTCGC TTACTTCTAC TTTGCTCGCC GCTTCCGCCA AATGCGAGTT
GATACACCAA CTGAAGGGGT AAAACGCCGC TTTGGTAACA CTAACGAGCA GTTTTTCACG
TGGGTAATCA TTCCGTTAAG TGTGATTAAC GCGGGCGTTT GGCTAAACGG TTTGGGTGTG
TTTGCTTCTG CGGTATTTAA TGCCGACATC GTGACTACCA TTTGGGTGAC TGGCCTTGCG
GTATTGGCTA TCTCATTGTT GAGTGGTGCG TGGGGCGTAG TGGCGTCGGA CTTTATTCAA
ACGCTGGTTG TTGCGGTTAT CTCCATTGCT TGTGCGGCAG TTGCATTGTA CGTCGTTGGC
GGCCCTGGCG AGATCGTTGA GAACTTCCCT GGTGGCTTCA TCATGGGCCC AGATATGAAC
TACCCACTAC TGTTAGTTTG TACGTTCATC TTCTTCGTAG TGAAACAGCT GCAAAGTATC
AACAACATGC AGGAGTCTTA CCGTTTCCTT AACGCGAAAG ATTCGAAAAA CGCAAGTAAA
GCTGCGCTGA TGGCGCTTGT GATGATGCTA TTTGGCGCGG TAATTTGGTT CATCCCACCT
TGGGCTTCAG CAATCCTGTA CCCAGATGCA GCAACGCAAT ACTCATCATT GGGTGCGAAA
GCAAGCGATG CGGTTTACCT TGTCTTCGCT CGTGAAACAA TGCCTCTAGG CACCGTTGGT
CTGTTAATGG CAGGTCTGTT TGCGGCGACC ATGTCTTCGA TGGACTCTGC ACTAAACCGT
AACTCAGGTA TTTTCGTTCG TAGCTTCTAC TCAAACATTG TGCGTAAAGG CCAAGCTTCG
GATAAAGAGC TACTGCGTGC TGGTCAAATC GCATGTTTGG TGAACGGCAT CCTCGTTATC
ATGATGGCTC AGTTCTTCAA CTCACTGAAG CACCTAAGCT TGTTTGATCT AATGATGCAA
GTGGCGACGC TACTTCAATC ACCAATCCTA GTTCCATTGT TCCTTGGCAT CATCATTCGC
AGAACGCCGA AATGGGCACC ATGGGCAACA GTTGTGGTTG GTATGTTTGT CTCTTGGTCA
GTGGTGAAAA TCTTCACTCC AGAATTTGTT GGTAGCTGGT TCGGTATGGA TGAGCTAACA
CGCCGCGAAG CAGGTGAAAT GCGCACAATG ATCACCATTG CTGCTCACCT TGTCTTTACT
GCTGGTTTCT TCTGCCTATC GACTCTGTTC TACAAAGAAG AAACAGACAC GCACAAAGAG
ACAACGGCGG AATTCTTTAA AGATGTGGAC ACCGAGTGTG TTGCAGAAGA AGGCCAAGAC
ATTGTTGACC GCATGCAACG CGCGAAATTG GGTACGCTGG TTATCTACAT GGCCGCAGGT
TTAACACTGA TGGTGTTGAT TCCAAACCCA CTATGGGGCC GCTTATTGTT CCTTGCCTGT
GCAGCGTCAG TCTTTGCTGT GGGCTACGGC TTGAAGAAGA GTGCCAAGCT AGACACACAG
CCCTCTAAAG TAGCCGCGAC AACGACCCAA TAA
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| Protein sequence | MEYDYLVIAG YFALMVAISL LFKKMASNST SDYFRGGGKM LWWMVGATAF MTQFSAWTFT
GAAGKAFNDG FAVLAVFVGN MVAYVFAYFY FARRFRQMRV DTPTEGVKRR FGNTNEQFFT
WVIIPLSVIN AGVWLNGLGV FASAVFNADI VTTIWVTGLA VLAISLLSGA WGVVASDFIQ
TLVVAVISIA CAAVALYVVG GPGEIVENFP GGFIMGPDMN YPLLLVCTFI FFVVKQLQSI
NNMQESYRFL NAKDSKNASK AALMALVMML FGAVIWFIPP WASAILYPDA ATQYSSLGAK
ASDAVYLVFA RETMPLGTVG LLMAGLFAAT MSSMDSALNR NSGIFVRSFY SNIVRKGQAS
DKELLRAGQI ACLVNGILVI MMAQFFNSLK HLSLFDLMMQ VATLLQSPIL VPLFLGIIIR
RTPKWAPWAT VVVGMFVSWS VVKIFTPEFV GSWFGMDELT RREAGEMRTM ITIAAHLVFT
AGFFCLSTLF YKEETDTHKE TTAEFFKDVD TECVAEEGQD IVDRMQRAKL GTLVIYMAAG
LTLMVLIPNP LWGRLLFLAC AASVFAVGYG LKKSAKLDTQ PSKVAATTTQ
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