| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000911 |
|---|
| Symbol | |
|---|
| ID | 8559224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | + |
|---|
| Start bp | 1041889 |
|---|
| End bp | 1042662 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 646408583 |
|---|
| Product | utilization protein for catechol-siderophore |
|---|
| Protein accession | YP_003288062 |
|---|
| Protein GI | 262396209 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2375] Siderophore-interacting protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAATA AGCCTCAACC TAAAACGATT GTTGTCACAG ACACAGAGAC AATTACTCCA
AACATGCAGC GCATTACCTT GCAAGGTGAG GCGCTGAGCC ACTTTCCTCG TGACTGCGAA
GGCAGTTACA TCAAATTACT GTTTAACGAT ATGGGTGGCT CGGATCTGAG CATCCTGTCA
GAAGACGACC GACCAATCAT GCGCACTTAC ACAATTCGAC GCTTTCATCC AGAAACCAGC
TCAATCGAAG TGGATTTCGT CCGACACGTA ACGCAAGATC TGCAATGCGG ATTTGCAGCA
CGTTGGGCAA TGGCCGCGCA AAAAGGCGAC ACGATCAGCA TCGTGGGGCC GGGTAGCATC
TCCAACTTAA ATACGGAGGC GGATTGGTTC TTCATGGCTG CCGATATGAC GGCACTTCCA
GCGCTTTCTG CGAAAGTTCG TACGTTGCCA GAAGAGGCCA AAGGCTATGC AGTGATCAGC
GTGATGTCTC CAGCCGACAT CCAACCCCTA CATGCGCCAG CAGGCATGGA GTTGATTTGG
TTAACCGAAG GGCAAGCCTT GGCTGATAGC GTTCGCGAAC TCGAGTGGTT AGATGGTAAC
GCTTCGATAT GGTGTGCGTG TGAGTTCGAT TCAATGCGTG CGCTGCGCCA ATATTTCCGC
AATGAGAAAG AAGTCGATCG CGAGAATATC TACATCAGCA GCTATTGGAA GCAAGGCGTG
TCGGAAGACG GGCACAAAGT GATTAAACGT GAAGACGCGG AATCCAATCA ATAG
|
|---|
| Protein sequence | MKNKPQPKTI VVTDTETITP NMQRITLQGE ALSHFPRDCE GSYIKLLFND MGGSDLSILS
EDDRPIMRTY TIRRFHPETS SIEVDFVRHV TQDLQCGFAA RWAMAAQKGD TISIVGPGSI
SNLNTEADWF FMAADMTALP ALSAKVRTLP EEAKGYAVIS VMSPADIQPL HAPAGMELIW
LTEGQALADS VRELEWLDGN ASIWCACEFD SMRALRQYFR NEKEVDRENI YISSYWKQGV
SEDGHKVIKR EDAESNQ
|
|---|
| |