| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000909 |
|---|
| Symbol | |
|---|
| ID | 8559222 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | + |
|---|
| Start bp | 1038907 |
|---|
| End bp | 1039491 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 646408581 |
|---|
| Product | putative threonine efflux protein |
|---|
| Protein accession | YP_003288060 |
|---|
| Protein GI | 262396207 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.850609 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATATC ATCAACTGGG CGCTTTGGCG TTGTTCGCTT TTGTCTCCAC TTTTACGCCG
GGTCCCAATA ACATTATGTT GATGACCTCA GGGGCAAATG TTGGCTTTAA ACGAACCATT
CCACACATGT TGGGCATTAC CTTCGGTTTT GGTGCCATGC TAATTTTGGT GGGTATTGGC
TTGATGAGCC TCTTCAACGC TTACCCGATT ACTCACTCCA TTTTGAAAGT ATTGAGCTTG
AGTTATTTGC TGTACTTGAC GTACAAAATC GCCACGAGCG GCAAAACCGA AGCAAAACAC
GATTTTCGCC CAATGTCTTT TTTAGGGGCT GTCGCATTCC AGTGGGTAAA CCCAAAAGGT
TGGTCGATGG CGTTGACGGC GATTACGGTA TACACCAGCG GCGGTTCTTG GCTTGAACTG
ACTTTTATCG CCGGTATCTT CTGTTTAGCC AACTTGCCAT CGGTAACATT TTGGACCGCG
GCAGGCATGC AACTTCAACG CTGGTTGACC ACATCTAGGC GTGTAAAAGG GTTTAACTAT
GGGATGGCAG CGCTTTTACT GCTGTCGACT ATCCCAATGA TATAG
|
|---|
| Protein sequence | MEYHQLGALA LFAFVSTFTP GPNNIMLMTS GANVGFKRTI PHMLGITFGF GAMLILVGIG
LMSLFNAYPI THSILKVLSL SYLLYLTYKI ATSGKTEAKH DFRPMSFLGA VAFQWVNPKG
WSMALTAITV YTSGGSWLEL TFIAGIFCLA NLPSVTFWTA AGMQLQRWLT TSRRVKGFNY
GMAALLLLST IPMI
|
|---|
| |