Gene VEA_000899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000899 
Symbol 
ID8559212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1029684 
End bp1030928 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content46% 
IMG OID646408571 
Productmembrane protein 
Protein accessionYP_003288050 
Protein GI262396197 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAACTGA ATCTTCATCT TACACCTCAT TTTGGTCACG AAATAGACAT ACACGCACGT 
TTTAATAAAC CTACTGTTGA GCGTTCGCAA GCGAGACAAA ACTACGATAT GTCTGAGACG
ATACTTAAGC GCACATACCT AACGAGTGAA CAAAAGACAC AAAAGCCAAG TTCACTGATT
CCGCCTCAAA CCTACCATGC GCAGTTGGCG CACCGTGTTC ACCACTCGCC TCAATTTGAA
AACGGCCGCG TTAAAAACGA GATGCCAAAT GTCCCTAGTC CGCAATCGTT CTGGCAGGTT
TGTTGGAGTT ATCTTGGTGG TAGAACACCG TTGAGTCCTA ACGAACATCT GCCACATTCC
CCAATTCAAC CCACGCAGTT TGCGCAGCGA AGTGAATCGA TGCGCCTTAC TTGGCTGGGC
CATTCCACTA TGCTGGTGGA GGTCGATGGA ATTCGAATTC TGACCGATCC GGTATTTGAT
TACGCTTCTC CGTTCATCGC AAAAGCGTGG TTTGAACGCA ATATTCCCAA TACTCACGCC
AGAGATTGTT TGCCGATTCC TGAAATTATC GTGATTTCGC ACGATCATTA CGACCATTTA
GAAGCGTCGA CCATACGTTT CTACGCCGAT AAATCCGTGA TGTTTTATGT GCCCTTAGGG
GTTGGCAAGC ATCTGATAAA ATGGGGCGTT TGCGCAGACA ACATCGTGGA ATTCGATTGG
TGGGATAGCG TGCACTATGC TGGAATCGAA CTGATTTGTA CGCCCGCTAA CCATAATTCG
GGTCGTACTT ATTTCGATAA AAACTCGACC TTGTGGGCTT CTTGGGTCAT CAAAGGCAAA
GAAGAGACGC TCTATTTTAG TGGCGATTCA GCTTACGATT CGCACTTTTC TGAGATCGCA
CAGCGATGTG GGCCAATCGA CATTGCCTGT TTGGAAGTGG CTGCCGATGT GAAAGACCAA
GGTTATCCGG TCGAAAACTG GGGGCACATG CAGGCTCATC ATACCGTGCA AGCGTTTCGC
GATTTAAATG CGAAAAAACT GTTGCCAGTA CATTGGGCTA CATACGAACT GTTTACTCAC
CGCTGGGACG AACCGATTTT AGATTTGCTT ACCCATTGTC AAAAAGAACA TATAACGCTG
CTGACGCCAA TGCCGGGGGA GAGTTTTTAC GTTCATCAAG AACATATAAA TAAACAATGG
TGGCGAGAAA AAGAAATATG TGAGCCAGAT ATAATTTTGA CTTAA
 
Protein sequence
MKLNLHLTPH FGHEIDIHAR FNKPTVERSQ ARQNYDMSET ILKRTYLTSE QKTQKPSSLI 
PPQTYHAQLA HRVHHSPQFE NGRVKNEMPN VPSPQSFWQV CWSYLGGRTP LSPNEHLPHS
PIQPTQFAQR SESMRLTWLG HSTMLVEVDG IRILTDPVFD YASPFIAKAW FERNIPNTHA
RDCLPIPEII VISHDHYDHL EASTIRFYAD KSVMFYVPLG VGKHLIKWGV CADNIVEFDW
WDSVHYAGIE LICTPANHNS GRTYFDKNST LWASWVIKGK EETLYFSGDS AYDSHFSEIA
QRCGPIDIAC LEVAADVKDQ GYPVENWGHM QAHHTVQAFR DLNAKKLLPV HWATYELFTH
RWDEPILDLL THCQKEHITL LTPMPGESFY VHQEHINKQW WREKEICEPD IILT