Gene VEA_000893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000893 
Symbol 
ID8559206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1022067 
End bp1023374 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content47% 
IMG OID646408565 
Producthypothetical protein 
Protein accessionYP_003288044 
Protein GI262396191 
COG category[S] Function unknown 
COG ID[COG5361] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAA AATTACTCGT TACTCTATTG GGATTATCAG CGCTAGGAGC CAGCCCTGTA 
TTTGCGGCTA ACACCAATGT TGATCTTGCA GAAGATGCTT ATATCTACGG CTACTCTATT
GATGAAGCGT ACAAGTTTTT CTATCACACG GCGGTAGAAA ACAACTATCC ACTGAACCGC
TTTCAGAATA TTCGTGCTCT AGCTGATGAC TCTTACACCG CTCACCCAAC CATTAATAAC
GATACGCTTC ACCTTATGGG CTGGTTAGAT GTTGCTGCAG AACCTGTCAT TGTGAGCGTA
CCTGATATGG ATGAAGGCCG TTACTGGATC TTGCACACAA TGGACATGGG CCACTACACC
AACGCAGCGT TCAGTTCTCG TACTCGCGGC ACAAAAGGCG GCCAGTTCAT GTTTGCAGCA
CAAGATTGGC AAGGTGAAGT GCCAGCTTCT GTCGACGAAG TGGTTCGCGT AGACAGCAAC
CTTGTGAAGC TGATGGGTCG CATCATGGCA GTGAATGACG AAGATGCGAA AGTCGCGCTT
AACTACATGG ACCAATGGAA CATTCGTACC CTATCGGAAT ATTTAGGTAA GAACGGTCCC
AAACCAGTAC AAAGAACGTA TCCAGATCCA AAAAATTCAA CATGGCTTGA ACGCGTGAAC
TTCGTGCTAT GTGATGGCTC GATGGGCAAT GCAGACAAAC AGTGGTTGGA CAAATACCAA
TCTATCGGCG TTGAACCATG CAAAACTGAC TTCACACCTG AGCAGCTAAA ACTGGCAAAA
GTTGGTGAGA AGAAAGGTAT GGAACACCTC GTCGAACTTG CACCTAAAAT GACAGATGCT
CGTACGTTGC TTGGTACACG CGATACCTTG GGTGATGCGC CACGCGATAT TTTTGCAGAA
GGTACTTACC TTGGTCAGTG GGGCTTACCA CCTATCGAAG CGTCTTACCG TAAATCAGAT
TTCGACAGCA CTGGTCAAAA ACTGGATGGT TCGAAGCATG ATTACGTGAT GCGCTTTAAA
GCGCCGAACG TCAGCGAATT CTGGTCTGTT ACTATTTACG GCAACGACAA CCGTTTGATG
GCGAAAAACG ACCTAAACCG TCACAGCCGT GGCGACCGAA CCATGAAAGC GGACAAAGAC
GGTTACTACA CCATTTACAT GAGTGCGAAC GAGAAAGGCC GTGCAGACGA TCCAAACTTC
TTGCCAGTAC CTGAAAAACC GTTCTACGCC ATCATGCGTT TCTACGGCGC AGACGATGTA
ATCCAAAGTG GTGAGTATCA AATGCCTGAA ATCAAAGTAG TTAAATAA
 
Protein sequence
MKQKLLVTLL GLSALGASPV FAANTNVDLA EDAYIYGYSI DEAYKFFYHT AVENNYPLNR 
FQNIRALADD SYTAHPTINN DTLHLMGWLD VAAEPVIVSV PDMDEGRYWI LHTMDMGHYT
NAAFSSRTRG TKGGQFMFAA QDWQGEVPAS VDEVVRVDSN LVKLMGRIMA VNDEDAKVAL
NYMDQWNIRT LSEYLGKNGP KPVQRTYPDP KNSTWLERVN FVLCDGSMGN ADKQWLDKYQ
SIGVEPCKTD FTPEQLKLAK VGEKKGMEHL VELAPKMTDA RTLLGTRDTL GDAPRDIFAE
GTYLGQWGLP PIEASYRKSD FDSTGQKLDG SKHDYVMRFK APNVSEFWSV TIYGNDNRLM
AKNDLNRHSR GDRTMKADKD GYYTIYMSAN EKGRADDPNF LPVPEKPFYA IMRFYGADDV
IQSGEYQMPE IKVVK