Gene VEA_000888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000888 
Symbol 
ID8559201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1018628 
End bp1019164 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content46% 
IMG OID646408560 
Productprotein of unknown function DUF924 
Protein accessionYP_003288039 
Protein GI262396186 
COG category[S] Function unknown 
COG ID[COG3803] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.777561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCAAC AAATCATCAA GTTCTGGTTC GAAGAGCTAA CGCCTCAAAA CTGGTTTGAA 
AACAACCCAG AACTGGACAA ACATATTGCA TCACGATTTG CCTCGGTACT AGAACAAGCC
GCTCGTTGTG AACTGTTTAA TTGGCGTGAC AGCGCACAAG GACGATTGGC CGAAATCATC
GTCCTCGATC AGTTTTCACG GAATGTGTAT CGCAACACCC CAAAAGCGTT TGCGCAAGAC
CCGCTCGCAT TAGCATTGGC TCAAGAAGCA ATTCGGTTAG GACACGATCA AGAATTAGTG
CCTGAGCAGC TAAGCTTTTT GTACATGCCT TTTATGCACA GCGAATCTCG CCTCATTCAT
GTCGAAGCAG AGAAATTGTT TCGCGCATCA GGGCTTGAAA GTAACTACGA TTTTGAGCTA
AAACACAAAG CCATCATCGA CCAATTTGGA CGTTACCCAC ATCGCAACGC CATCTTGGGA
AGAGAAAGCA CACCTGAAGA GTTAGCATTT TTGCAGCAAC CCGGTTCCAG CTTTTAA
 
Protein sequence
MHQQIIKFWF EELTPQNWFE NNPELDKHIA SRFASVLEQA ARCELFNWRD SAQGRLAEII 
VLDQFSRNVY RNTPKAFAQD PLALALAQEA IRLGHDQELV PEQLSFLYMP FMHSESRLIH
VEAEKLFRAS GLESNYDFEL KHKAIIDQFG RYPHRNAILG RESTPEELAF LQQPGSSF