| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000846 |
|---|
| Symbol | |
|---|
| ID | 8559152 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | - |
|---|
| Start bp | 970661 |
|---|
| End bp | 971215 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 646408511 |
|---|
| Product | ferric siderophore transport system biopolymer transport protein ExbB |
|---|
| Protein accession | YP_003287997 |
|---|
| Protein GI | 262396144 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCAGA TCCTACTCAA CACATTGGGT TTGATCAGTG AGGATTGGGC CACAACCTTG
ATGAGCTTTA TGCAGCAAGG TGGTCAAATC CTATGGTGGC TGGCTGCCGT CGTGGCGGTG
TGCTGGCTGT TGGTTATGGA GCGAGTTATT TATCTCACAA CGGTTTTCCC TGGGGTAAAG
AAACAGCTTT GTGAGCAGTG GCAAGCAAGA TCAGAGCACC ACTCTTGGTA CGCGCATCAA
ATCCGTGAAG GATGGATTGC AAAAGCGCAA ATCGAACTGC GCCAAAACCT ATCGACTATT
AAGCTGCTTG TGGCGGTTTG CCCAATGCTA GGGTTGTTAG GGACGGTGAC GGGCATGATT
ACGGTGTTTG ACGTAATGGC ATCGCAAGGC AGCAGCAATC CGAAATTGAT GGCTTCAGGT
ATCTCACTTG CTACGCTGCC AACCATGGCG GGTATGGTAG CAGCGCTGGC GGGCATGTTT
ATTCATGCTC GCCTTAGCAA AGTGTGTGAA CGAAAAGCTA TCCAGTTAGA ACAATCTTTA
AGGAGTCAAA AGTGA
|
|---|
| Protein sequence | MEQILLNTLG LISEDWATTL MSFMQQGGQI LWWLAAVVAV CWLLVMERVI YLTTVFPGVK
KQLCEQWQAR SEHHSWYAHQ IREGWIAKAQ IELRQNLSTI KLLVAVCPML GLLGTVTGMI
TVFDVMASQG SSNPKLMASG ISLATLPTMA GMVAALAGMF IHARLSKVCE RKAIQLEQSL
RSQK
|
|---|
| |