Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000822 |
Symbol | |
ID | 8559128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 947244 |
End bp | 948110 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 646408487 |
Product | transcriptional regulator AraC family |
Protein accession | YP_003287973 |
Protein GI | 262396120 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.184938 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCACACA TCGAAAAAGT ACCGCAAAGA CCAGGTTTTT CTTGGCGCTA TCGTCGCATT GATGAGCCAG AAAAAGAGTA CGATCTCCAT TTTCACGATG ATGTGTTTGA ATTAGTCATC CATCGCCACT TCACTGGCAG TTTGCATATT GGTCATCACG AATTAGAAGT TACTCACAAC CAAATGCTAT TGATCGCGCC AGGTGTGCCT CACTCTATTC ATTCCACATT GGTCGAGAGC AAGTGCGAGA CTCATGTGAT CTGGTTTAAG CGTGAGTGGA TTGCCAATTT GATGTTCTAT TGCGCAGAGC TTCGAAAGCT TGATCCGCTT TTAAAGGCGG CCAACAAAGG TGTGGTGTTT TCTGAGCGGA CAGCTCAGCA CGTTGTGGAT CTTCTACATG AGCTCATGAC GTTTCCTGCA ATGGAGCAAC TCTCTAGATT TCTCCATGTT TTGTCTCTGA TTGCTCACGA TGAAGGGGCG AAAACACTGA TGACTCACTC TTACTTATCG ATGAGTGAAC ACGAATTACA GGAAAGAGAA CGAGTGGCAA GTGTCAACGC GTATCTCGAA CAGCACTTTG CTAGCAAAGT GACGCTCGCG AACTTGGCGA ACCATTTATC ACTGAGTGAC AGTGCGGTCA CAAGATTGTT TCAAAAGCAC TTTAAAGAGC CGTTTAGCCA ACGCCTAATG AAATTGCGGA TCAATCATGC CGCAGATTTG CTGCAATCAA CGCCTTTGCC GATTGGAATT GTGTTTGAGA GAGTAGGGTA TCGAAACCAA GCCCTGTTTA ATCGTCACTT CAAAACGTAT AAAGGGCTTA CGCCACGCGA GTACCGTCAG CAATATCAGC AGCGAATCCA GCCTTAA
|
Protein sequence | MAHIEKVPQR PGFSWRYRRI DEPEKEYDLH FHDDVFELVI HRHFTGSLHI GHHELEVTHN QMLLIAPGVP HSIHSTLVES KCETHVIWFK REWIANLMFY CAELRKLDPL LKAANKGVVF SERTAQHVVD LLHELMTFPA MEQLSRFLHV LSLIAHDEGA KTLMTHSYLS MSEHELQERE RVASVNAYLE QHFASKVTLA NLANHLSLSD SAVTRLFQKH FKEPFSQRLM KLRINHAADL LQSTPLPIGI VFERVGYRNQ ALFNRHFKTY KGLTPREYRQ QYQQRIQP
|
| |