Gene VEA_000822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000822 
Symbol 
ID8559128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp947244 
End bp948110 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content46% 
IMG OID646408487 
Producttranscriptional regulator AraC family 
Protein accessionYP_003287973 
Protein GI262396120 
COG category[T] Signal transduction mechanisms 
COG ID[COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.184938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACACA TCGAAAAAGT ACCGCAAAGA CCAGGTTTTT CTTGGCGCTA TCGTCGCATT 
GATGAGCCAG AAAAAGAGTA CGATCTCCAT TTTCACGATG ATGTGTTTGA ATTAGTCATC
CATCGCCACT TCACTGGCAG TTTGCATATT GGTCATCACG AATTAGAAGT TACTCACAAC
CAAATGCTAT TGATCGCGCC AGGTGTGCCT CACTCTATTC ATTCCACATT GGTCGAGAGC
AAGTGCGAGA CTCATGTGAT CTGGTTTAAG CGTGAGTGGA TTGCCAATTT GATGTTCTAT
TGCGCAGAGC TTCGAAAGCT TGATCCGCTT TTAAAGGCGG CCAACAAAGG TGTGGTGTTT
TCTGAGCGGA CAGCTCAGCA CGTTGTGGAT CTTCTACATG AGCTCATGAC GTTTCCTGCA
ATGGAGCAAC TCTCTAGATT TCTCCATGTT TTGTCTCTGA TTGCTCACGA TGAAGGGGCG
AAAACACTGA TGACTCACTC TTACTTATCG ATGAGTGAAC ACGAATTACA GGAAAGAGAA
CGAGTGGCAA GTGTCAACGC GTATCTCGAA CAGCACTTTG CTAGCAAAGT GACGCTCGCG
AACTTGGCGA ACCATTTATC ACTGAGTGAC AGTGCGGTCA CAAGATTGTT TCAAAAGCAC
TTTAAAGAGC CGTTTAGCCA ACGCCTAATG AAATTGCGGA TCAATCATGC CGCAGATTTG
CTGCAATCAA CGCCTTTGCC GATTGGAATT GTGTTTGAGA GAGTAGGGTA TCGAAACCAA
GCCCTGTTTA ATCGTCACTT CAAAACGTAT AAAGGGCTTA CGCCACGCGA GTACCGTCAG
CAATATCAGC AGCGAATCCA GCCTTAA
 
Protein sequence
MAHIEKVPQR PGFSWRYRRI DEPEKEYDLH FHDDVFELVI HRHFTGSLHI GHHELEVTHN 
QMLLIAPGVP HSIHSTLVES KCETHVIWFK REWIANLMFY CAELRKLDPL LKAANKGVVF
SERTAQHVVD LLHELMTFPA MEQLSRFLHV LSLIAHDEGA KTLMTHSYLS MSEHELQERE
RVASVNAYLE QHFASKVTLA NLANHLSLSD SAVTRLFQKH FKEPFSQRLM KLRINHAADL
LQSTPLPIGI VFERVGYRNQ ALFNRHFKTY KGLTPREYRQ QYQQRIQP