Gene VEA_000812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000812 
Symbol 
ID8559118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp932841 
End bp933851 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content48% 
IMG OID646408477 
Productimmunogenic protein 
Protein accessionYP_003287963 
Protein GI262396110 
COG category[R] General function prediction only 
COG ID[COG2358] TRAP-type uncharacterized transport system, periplasmic component 
TIGRFAM ID[TIGR02122] TRAP transporter solute receptor, TAXI family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATGA ATAAGCTGGT AAAAGCTTTG GCTGTCGCTG TGACTTCTTT TGGTATTGCT 
GCTAACGCTG CAGCAGAAGA TCGTAGCTAC ATTCTTGCAA CGGCATCGAC AGGTGGTACT
TACTACCCTG TGGGCGTAGC GTTGGCGACG TTAAGCAAAG TGAAATTGGC ACCAAAGCAC
CACTTCTCCC TTTCTGCAAT CAGCTCTGCG GGCTCTGGTG AAAACGTTAA ACTGCTGAAC
GAAAACGAAG CACAGTTCGC GATTCTGCAA GGTCTTTACG GTGCATGGGC TTGGTCTGGT
GAAGGTCCTT ATGAGAAGAG CGGTCGCCAA GAACAACTTC GTTCAGTCTC TATGCTGTGG
CAAAACGTTG AGCACTTTAT TGTTCGCTCT GATCTAGCAA AAACGGGCAC TGTTACTGAC
CTGAACAACC TAGATGGCAA GAAGTTCTCT ATCGGTAAGA AGAACTCTGG TACTGAAAAC
TCTGGTCGCC AAATCATGAA AGGTCTGAAA GTAGATCCTG ATAAATTCAA TCTTGCTTAC
ATGGGCTACG GCGGCAGTGC GAGCGCACTT CAAAACGGCA CCATTGACGG CATGAACACG
CCTGCGGGTG TACCTGTTGG TGCGGTTACT CAAGCTTTTG CTGCGCTGGG TAAAAACATT
TCGATTCTTT CGTTTACTGA CGAGCAAATC AAAGAGGCGA ACGGCAACTA CAACCTATGG
ACGAAGTACG AGATCCCAGC GAACACGTAC CCAGGCCTAG ATAAGCCGAT CACTACTATT
GCACAGCCAA ACTTCTTGGC TGTTCGTGAA GATATCTCGG AAGAAGACGT TTACCAACTA
ACCAAAGCGA TCTACGAGAA CCTGCCTTTC CTACAAGGCA TCCACAAAGC AACAAAAGCA
ATGGCGATTG AGAAAGCGAT TGCTGGCTTG CCAGTGCCTC TTCACCCAGG TGCGGCGCGT
TACTACAAAG AAATGGGCAT CGAAATCCCA TCAGACCTAA TGGCGAAATA A
 
Protein sequence
MKMNKLVKAL AVAVTSFGIA ANAAAEDRSY ILATASTGGT YYPVGVALAT LSKVKLAPKH 
HFSLSAISSA GSGENVKLLN ENEAQFAILQ GLYGAWAWSG EGPYEKSGRQ EQLRSVSMLW
QNVEHFIVRS DLAKTGTVTD LNNLDGKKFS IGKKNSGTEN SGRQIMKGLK VDPDKFNLAY
MGYGGSASAL QNGTIDGMNT PAGVPVGAVT QAFAALGKNI SILSFTDEQI KEANGNYNLW
TKYEIPANTY PGLDKPITTI AQPNFLAVRE DISEEDVYQL TKAIYENLPF LQGIHKATKA
MAIEKAIAGL PVPLHPGAAR YYKEMGIEIP SDLMAK