Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000812 |
Symbol | |
ID | 8559118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 932841 |
End bp | 933851 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646408477 |
Product | immunogenic protein |
Protein accession | YP_003287963 |
Protein GI | 262396110 |
COG category | [R] General function prediction only |
COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATGA ATAAGCTGGT AAAAGCTTTG GCTGTCGCTG TGACTTCTTT TGGTATTGCT GCTAACGCTG CAGCAGAAGA TCGTAGCTAC ATTCTTGCAA CGGCATCGAC AGGTGGTACT TACTACCCTG TGGGCGTAGC GTTGGCGACG TTAAGCAAAG TGAAATTGGC ACCAAAGCAC CACTTCTCCC TTTCTGCAAT CAGCTCTGCG GGCTCTGGTG AAAACGTTAA ACTGCTGAAC GAAAACGAAG CACAGTTCGC GATTCTGCAA GGTCTTTACG GTGCATGGGC TTGGTCTGGT GAAGGTCCTT ATGAGAAGAG CGGTCGCCAA GAACAACTTC GTTCAGTCTC TATGCTGTGG CAAAACGTTG AGCACTTTAT TGTTCGCTCT GATCTAGCAA AAACGGGCAC TGTTACTGAC CTGAACAACC TAGATGGCAA GAAGTTCTCT ATCGGTAAGA AGAACTCTGG TACTGAAAAC TCTGGTCGCC AAATCATGAA AGGTCTGAAA GTAGATCCTG ATAAATTCAA TCTTGCTTAC ATGGGCTACG GCGGCAGTGC GAGCGCACTT CAAAACGGCA CCATTGACGG CATGAACACG CCTGCGGGTG TACCTGTTGG TGCGGTTACT CAAGCTTTTG CTGCGCTGGG TAAAAACATT TCGATTCTTT CGTTTACTGA CGAGCAAATC AAAGAGGCGA ACGGCAACTA CAACCTATGG ACGAAGTACG AGATCCCAGC GAACACGTAC CCAGGCCTAG ATAAGCCGAT CACTACTATT GCACAGCCAA ACTTCTTGGC TGTTCGTGAA GATATCTCGG AAGAAGACGT TTACCAACTA ACCAAAGCGA TCTACGAGAA CCTGCCTTTC CTACAAGGCA TCCACAAAGC AACAAAAGCA ATGGCGATTG AGAAAGCGAT TGCTGGCTTG CCAGTGCCTC TTCACCCAGG TGCGGCGCGT TACTACAAAG AAATGGGCAT CGAAATCCCA TCAGACCTAA TGGCGAAATA A
|
Protein sequence | MKMNKLVKAL AVAVTSFGIA ANAAAEDRSY ILATASTGGT YYPVGVALAT LSKVKLAPKH HFSLSAISSA GSGENVKLLN ENEAQFAILQ GLYGAWAWSG EGPYEKSGRQ EQLRSVSMLW QNVEHFIVRS DLAKTGTVTD LNNLDGKKFS IGKKNSGTEN SGRQIMKGLK VDPDKFNLAY MGYGGSASAL QNGTIDGMNT PAGVPVGAVT QAFAALGKNI SILSFTDEQI KEANGNYNLW TKYEIPANTY PGLDKPITTI AQPNFLAVRE DISEEDVYQL TKAIYENLPF LQGIHKATKA MAIEKAIAGL PVPLHPGAAR YYKEMGIEIP SDLMAK
|
| |