| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000811 |
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| Symbol | |
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| ID | 8559117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 930629 |
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| End bp | 932752 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646408476 |
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| Product | TRAP-type uncharacterized transport system fused permease component |
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| Protein accession | YP_003287962 |
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| Protein GI | 262396109 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACT CAATAGAAAA GGAATTGCAG AAATTTGAGC TGCCCACGCG CACAGATTTT
CCGTGGGTAA CCACCACAAT CACAGTGTTT GGCGTGGTGT TGTCTGCTTT GCACATTTGG
TTTAATACCT TATCGACGTT ACCGGAGTTA TGGATTTCCG CGACCCACTT TGCTGGTTTT
GCGGTGATTT GTGCGCTTTG GTATCCGGCT CATATCTCTC TCAAGCAGAG TAAGGTTGCG
CTCGGCATCG ATGTGTTAAT TGCTATGGGT GCGGTCGCGT GTTTGCTCTA CATTCCGTAT
GCCGAAGATG CGCTGTATGA ACGTGGCGTG AAGTTCGTGA CCAGCGATTG GGTCTTTGCC
ATCATGGCAA TTTTGATTGT TATTGAATTG ATTAGACGCA CCATGGGCTG GTTTATTCCA
GTGCTGATTG TGGTGTGTTT GAGTTACGTT GTGCTTTGGG GTAAGTGGGC AACAGGCATT
TTCCACTTCC CGGGTTTGAG CATGGAAACC TTGCTCTACC GTAGCTTCTA TTCTTCTGAG
GGCATGTTTG GCTCTATTTC GCGCATCAGT TGGACTTTCG TATTCATGTT CATTCTGTTT
GGGGCGTTTC TTGTTCGCTC TGGTGTCGGT GATTACATTA TCAATGTGGC ACGTGCTGCG
GCTGGCAAAA TCATTGGTGG TCCGGGTTTT ATCGCAGTTA TTGGCTCCGG TTTGATGGGC
TCAGTGTCTG GCTCAAGCGT GGCAAATACG GTTTCAACCG GTGTTATCAG TATTCCTTTG
ATGCAAAAAG CAGGTTTTCC TTCGCGCTTC GCGGCGGGCG TTGAAGCTGC GGCGTCGACA
GGTGGTCAGT TGATGCCACC AGTGATGGGA GCGGGCGCTT TCATCATGGC GTCTTACACG
CAAATTCCTT ATGTTGATAT TATTGCCGTT TCTTTCATTC CTGCTCTTAT CTATTTCTTG
TCTGTGGCGT TCTTTGTGCG TATCGAAGCC AAACGCAGCG GCGTTCAAAA AATCACGACC
AGCGATGAAT CTCTACTGAA AGTGTTGATC AGCGGTTGGC ACAACCTTAT CCCACTGGCG
GTATTGGTCA CTTTGTTGGT TCAAGGTTTT ACGCCAACTT ACGCTGCGGG CTTGTCGATC
ATTTCAGTGG TGGTGGCTTC TTGGTTTTCG AAAGATCATA AGATGGGACC AAAAGCGATC
ATCGAAGCAC TTTCGCAAGG CGCGAAAAAC ATGGCGACAA CCGCTGTATT GCTGGTGGGT
ATTGGTTTGG TGATCAACGT GATCAGTACA ACGGGCATCG GCAACACGTT CTCATTGATG
ATCGATGGTT GGGCGAATGG TGACTTGTTC ATCATGATCG TTCTGATTGC ACTCGCTTCT
CTTGTTTTGG GTATGGGCTT ACCCGTGACA GCGGCGTATA TTGTATTGGG CACATTGTCT
GCCCCTGCGC TTTACAAGTT GATTGCGGAA AACCAATTGC TTGAATTGAT GGTGTCAGGT
CAATTGCCAG AGCAAGCAAA AGCGATCTTT ATGTTGGCAG CGCCAGAAAA GCTGGAACTG
CTTAATGCAC CAATGGCGTT GGAAACGGCG AAAGAAATGG TGGCGCTAGT ACCTGCGGAC
TTTATGGAAA CCCTACTAGA ACAAAGTTTG GGTATGGAAG CGGTAGGCTT GGCATTGCTG
GCTGCTCACC TCATCATCTT CTGGCTATCG CAAGACAGCA ACGTAACGCC TCCAGTGTGT
TTGACCGCAT TTGCTGCGGC AACCATCGCG AAAACACCGC CAATGCGTAC TGGTCTGATG
GCGTGGAAAA TCGCCAAAGG TTTGTATCTT GTGCCGCTAC TTATTGCCTA CACAGGCTTA
GTCAGTTGGG ATGTGACGTC AGTGATTACC GTAGGCTTCT TTGCCATCAT CGGTACCTAT
GCATTGATTG GTGCGATTGA AGGCTACTTG GAAGGTCCTC TAAACATTCT GACGCGTCTC
TTGTTGGTAG TAGTAGGTAC ATTACTGGTT TGGCACGACA TCCCAATGTT GGTTCGTGTG
GCAAGCTGCG CGGTATTTGT CGCGGTGTTC ATTTACAGTG GTCGCAAGTT CAATTTGCAA
CAATCTCAAC TATCGGTTTT ATAA
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| Protein sequence | MSDSIEKELQ KFELPTRTDF PWVTTTITVF GVVLSALHIW FNTLSTLPEL WISATHFAGF
AVICALWYPA HISLKQSKVA LGIDVLIAMG AVACLLYIPY AEDALYERGV KFVTSDWVFA
IMAILIVIEL IRRTMGWFIP VLIVVCLSYV VLWGKWATGI FHFPGLSMET LLYRSFYSSE
GMFGSISRIS WTFVFMFILF GAFLVRSGVG DYIINVARAA AGKIIGGPGF IAVIGSGLMG
SVSGSSVANT VSTGVISIPL MQKAGFPSRF AAGVEAAAST GGQLMPPVMG AGAFIMASYT
QIPYVDIIAV SFIPALIYFL SVAFFVRIEA KRSGVQKITT SDESLLKVLI SGWHNLIPLA
VLVTLLVQGF TPTYAAGLSI ISVVVASWFS KDHKMGPKAI IEALSQGAKN MATTAVLLVG
IGLVINVIST TGIGNTFSLM IDGWANGDLF IMIVLIALAS LVLGMGLPVT AAYIVLGTLS
APALYKLIAE NQLLELMVSG QLPEQAKAIF MLAAPEKLEL LNAPMALETA KEMVALVPAD
FMETLLEQSL GMEAVGLALL AAHLIIFWLS QDSNVTPPVC LTAFAAATIA KTPPMRTGLM
AWKIAKGLYL VPLLIAYTGL VSWDVTSVIT VGFFAIIGTY ALIGAIEGYL EGPLNILTRL
LLVVVGTLLV WHDIPMLVRV ASCAVFVAVF IYSGRKFNLQ QSQLSVL
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