| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000800 |
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| Symbol | |
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| ID | 8559105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 917385 |
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| End bp | 918656 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646408464 |
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| Product | GGDEF family protein |
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| Protein accession | YP_003287951 |
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| Protein GI | 262396098 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3452] Predicted periplasmic ligand-binding sensor domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0410627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCATCGAA ATCAGCAAGA GCTTCACCAA GAGCGAGTTC AAGTTGAGGC CAAAGAGCAA
CTTTCCACCC TCCGTTCCAA TTTGGAAGCG GTACTTATGG CGGATATCTA TAAAGCCAGT
ACCTTGGCGA CACTTATTAC TTTACTGCCT AAAAACCAAG AAGACGAATT GAACATTGCG
GCTCACCGCA TTCTGAGCAA AAGCAAACAT ATTACGATCA TTGGCATTGC GAAGAATGAT
GTTATCAGTC ATATATTTCC CCGCCAAGGT AATGAGCGTT TAATCGGCCT CGATTACCGA
ACGGTGCCAC AGCAGTGGGT GCAGGTACAA AAAGCTAAGG ATATACAAGA AATATTTATA
GCAGGGCCTG TCAACTTGAT TCAAGGCGGC AAAGGCTTGA TCGTGCGGGT TCCGGTTTTT
CTTGATCCAC CGTTGAACCA AGATTATTGG GGTGTGATCA GTGCGGTGAT TAATTTTGAT
GCTCTGATGC GAGAAACTGG CGTGATCGAT TTCTCTTATC GCTATCCTTT GATGATTCGT
GGTTACGACA GTGGCGGTGC TTTTGGTGAC GTTTTCTTTG GCGCACTGAG TGAAACCAAA
AAGCCATACG CGAAAGAAAT GGTTCATTTT CCTTATGGTG GATGGAGTAT GGTGGTTTTC
TCCGGAGACA AACTCGACCG TCAAATTCCT TGGCATCAGC TTTATTTAGC AAGGCTTATC
GGTTATCCCA TTGTTTTTGC ACTGAGCCTC GCGCTTATTG CGATTTATCG CTTGTACACC
ATTGCGGATG ATAGAGCACT GCATGATGAA CTGACGCACT TACCAAACCG TCGCTATTTT
ATGAAGTTTT ACAAGCAGCA GTTTGAAATA GCGAAACGTT ACAAAAAGCG TTACAGCTTC
GCCTTAATCA ATATAGATCT GGATAGGTTT AAACATATTA ACGATACCTA TGGTCATGAC
GCAGGCGACA AGGTCTTAGT CGCTACGGCT GAAAGAGTGA AAAGCTCTCT GCGTAAATCA
GATATTGTGG CCCGAATGGG AGGGGATGAG TTTTTAGTTG TCGTTCATAA CCCTGGGACG
GAAGAAAATG TTCAGTCTCT GCTACAAAAG CTCAGGTTAG CTTTATGTTC GACGCCCGTG
ATTTACGATG AAGCGCTCAT CTACCTGAGA ACCAGCATTG GGTACGCGAT ATTTGATCCG
GACATGTCAT CTCCAGAGCA AATGATGAAA ATAGCCGATG AGAGAATGTA TCAACAAAAA
CATGGCGGAT GA
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| Protein sequence | MHRNQQELHQ ERVQVEAKEQ LSTLRSNLEA VLMADIYKAS TLATLITLLP KNQEDELNIA
AHRILSKSKH ITIIGIAKND VISHIFPRQG NERLIGLDYR TVPQQWVQVQ KAKDIQEIFI
AGPVNLIQGG KGLIVRVPVF LDPPLNQDYW GVISAVINFD ALMRETGVID FSYRYPLMIR
GYDSGGAFGD VFFGALSETK KPYAKEMVHF PYGGWSMVVF SGDKLDRQIP WHQLYLARLI
GYPIVFALSL ALIAIYRLYT IADDRALHDE LTHLPNRRYF MKFYKQQFEI AKRYKKRYSF
ALINIDLDRF KHINDTYGHD AGDKVLVATA ERVKSSLRKS DIVARMGGDE FLVVVHNPGT
EENVQSLLQK LRLALCSTPV IYDEALIYLR TSIGYAIFDP DMSSPEQMMK IADERMYQQK
HGG
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