| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000797 |
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| Symbol | |
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| ID | 8559102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 913567 |
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| End bp | 914580 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646408461 |
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| Product | GGDEF family protein |
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| Protein accession | YP_003287948 |
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| Protein GI | 262396095 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACG AGTTTAAAAA ATCGACCGCT AATTTGAAAA AAGCGGTCCC ACTAATGATC
AAAAATCATG TTGCTGCCAC GCCAGCCAAC TATGCGCTTT GGTATACCTA CGTTGACAAG
ACCATTCCTG AACTCAACTT TGAGTTGGAT ACGGTGTTAG AAAACTACGG TATCTGCCCG
CCTGCAACCA ATAAACAGCT TTATAACAAC TATGTTGCCA GTAAAGCAGA AACTAGCCTT
GAAGATCTTA GAACCAATGT AGAAGTTCTG CTGCATGAAG TGTCCAGCTC GATGAGCGAT
ACACTTTCAG ATACTTCTTC CTTTTCTGAA ATGGTAGACA AAAGTTTTAA TAAGCTAGAA
AAAGTTGAAG ACAACAGCTT AAGTATTGAA GAAGTGATGG TGGTGATTCG TCAACTTGTC
GCAGAGTCAC ACGAAATTCG TCACTCGACA AAGTTTTTGA ATAGCCAATT AACTAATGCG
AGTGAAGAAA TTTCTCGCCT CAAAAATCAG CTGGCTGAAG TACAGCAAGA CGCATTGTTT
GATGGTCTAT CCAACCTTTA CAACCGTCGA GCTTTTGATA AAGATCTGTC TTCGCTTATC
GCATCAAATC AAGCAATGAC CTTGATCATG CTTGATATCG ACCATTTCAA GTCATTTAAC
GACAATTATG GCCACCTTTT CGGCGATACG GTACTAAAAG CCATTGCCCG TCGACTACAA
CAAAGCTGTC GAGATGGAAT ATGCGCGTAT CGTTTTGGTG GTGAAGAGTT CGCTTTAATT
GTGCCCAATA AATCTCTGCG AATTGCTCGC CAATATGCAG ACACACTACG CCGCATGATA
GAAAAACTGC GCATCAGAGA TAAGCGTTCT GGTACACAAG TTCACAGCAT TACTGCTTCT
TTTGGGGTAG CAGAATATGA GGTGGGTGAT ACACCTGAAG CTCTGGTCAA TAAAGCCGAT
AAGCAACTTT ATGAGGCAAA ACAACTCGGT CGTAACCGCG TGATGCCCAT TTAA
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| Protein sequence | MTDEFKKSTA NLKKAVPLMI KNHVAATPAN YALWYTYVDK TIPELNFELD TVLENYGICP
PATNKQLYNN YVASKAETSL EDLRTNVEVL LHEVSSSMSD TLSDTSSFSE MVDKSFNKLE
KVEDNSLSIE EVMVVIRQLV AESHEIRHST KFLNSQLTNA SEEISRLKNQ LAEVQQDALF
DGLSNLYNRR AFDKDLSSLI ASNQAMTLIM LDIDHFKSFN DNYGHLFGDT VLKAIARRLQ
QSCRDGICAY RFGGEEFALI VPNKSLRIAR QYADTLRRMI EKLRIRDKRS GTQVHSITAS
FGVAEYEVGD TPEALVNKAD KQLYEAKQLG RNRVMPI
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