| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000794 |
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| Symbol | |
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| ID | 8559099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 909596 |
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| End bp | 910303 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646408458 |
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| Product | cell-cell signaling protein C-factor |
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| Protein accession | YP_003287945 |
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| Protein GI | 262396092 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACATAC TGATCGTTGG TGGAAATGGC GGCATTGGAT TGGCGATCGT TCAACAAGCG
CTAGTTCGCT TTCCCCAAGC TCGCGTGCAT GCCACTTATC GTAATCACCA ACCAGATTGG
CAACACCCAA ATGTATTTTG GCATCAAGTG GATGTATCGC AGGACGAGCA GGTGAAAGCA
CTCAGTGAGC AAATTGAACA TGTTGATTGG TTGGTGAACT GCGTTGGTAT GTTGCATACC
CAAGATAAAG GTCCTGAGAA GAATCTTAGC TCGCTCGACG CAGACTTTTT TCAGCAAACC
ATCATGGTTA ATACTTTGCC GAGTTTACTG TTGGCGAAAT ACTTCACGCC CAAGTTAAAA
CGCAGTACCA ACCCCAAGTT TGCGACCATT TCGGCCAAAG TTGGCAGTAT TAGTGATAAT
CACTTAGGCG GTTGGTACAG CTATCGTGCA TCGAAAGCCG CGTTAAATAT GTTCCTCAAA
ACCATGTCGA TTGAATGGCG GAGAATGGTC AAACACGGGA CTGTACTCGC TCTTCACCCA
GGCACAACAG ATACGGCTTT GTCGGCACCT TTTCAAGCGA ATGTACCTGA AGGAAAGCTG
TTTAGGCCAG AGCGTGTCGC GCGAGACTTA TGGGGATTGA TTGACAAAGC AACCCCGCAG
GATAGTGGGG CATTTTGGGC TTATGATGGT GCCTTGTTAC CTTGGTGA
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| Protein sequence | MDILIVGGNG GIGLAIVQQA LVRFPQARVH ATYRNHQPDW QHPNVFWHQV DVSQDEQVKA
LSEQIEHVDW LVNCVGMLHT QDKGPEKNLS SLDADFFQQT IMVNTLPSLL LAKYFTPKLK
RSTNPKFATI SAKVGSISDN HLGGWYSYRA SKAALNMFLK TMSIEWRRMV KHGTVLALHP
GTTDTALSAP FQANVPEGKL FRPERVARDL WGLIDKATPQ DSGAFWAYDG ALLPW
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