| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000776 |
|---|
| Symbol | |
|---|
| ID | 8559081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | + |
|---|
| Start bp | 891355 |
|---|
| End bp | 892611 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 646408440 |
|---|
| Product | thermolabile hemolysin precursor |
|---|
| Protein accession | YP_003287927 |
|---|
| Protein GI | 262396074 |
|---|
| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG3240] Phospholipase/lecithinase/hemolysin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAA AAACAATCAC ACTATTAACT GCATTACTTC CGCTTGCCTC TGCCGTTGCA
GAGGAGCCAA CATTATCACC AGAAATGGTT TCTGCGTCTG AAGTGGTCAG CACGCAAGAA
AATCAAACCT ATACTTACGT TCGCTGCTGG TATCGTACGA GCCACTCTAA GGATGATGCG
GCTACCGACT GGAAATGGGC GAAAAACCAA GATGGTAGTG ACTTCACTAT CGACGGTTAT
TGGTGGAGCT CTGTTTCATT TAAAAACATG TTCTACACCA ACACTTCACA AAACGTGATT
CGCCAGCGCT GTGAAGAAAC ACTAGATCTG GCGAACGAGA ACGCAGACAT TACGTTTTTT
GCTGCTGACA ATCGCTATTC TTATAACCAC ACGATCTGGA GCAATGATGC TGCAATGCAA
CCAGATCAAA TCAACAAAGT AGTGGCTTTG GGCGACAGCT TATCTGATAC AGGCAACATC
TTTAACGCTT CCCAATGGCG CTTCCCTAAC CCAAACAGCT GGTTCTTAGG TCACTTCTCG
AACGGTTTTG TTTGGACGGA ATACGTTGCT AAAGCCAAAA ACTTACCGCT TTATAACTGG
GCAGTTGGCG GCGCAGCAGG TGAGAACCAA TACATTGCGC TAACAGGTGT CGGCGAACAA
GTTTCTTCTT ACTTGACCTA CACAAAACTG GCGAAAAACT ACAACCCAGC AAACACATTG
TTTACGTTGG AGTTTGGTTT AAATGATTTC ATGAACTACA ACCGTAGCGT GCCGGAAGTA
AAAGCGGATT ACGCTGAAGC TCTGATTCGT CTAACAGACG CGGGCGCGAA GAACTTCATG
TTGATGACAC TGCCAGACGC AACCAAAGCA CCACAGTTCA AATACTCAAC GCAGGAAGAA
ATTGAAACGA TTCGCGCGAA AGTATTGAAA ATGAACGAGT TCATCAAAGC ACAAGCGATG
TACTATAAAG CTCAAGGTTA CAACATTTCA TTGTTTGATA CGCACGCGCT GTTTGAGACG
TTAACCTCGG CACCAGAAGA ACACGGGTTC GTGAATGCAA GTGATCCTTG TCTGGACATC
AACCGCTCAT CTTCTGTGGA TTACATGTAC ACCCATTCAT TACGCTCAGA GTGCGCGGCA
TCTGGCGCAG ATAAGTTTGT GTTCTGGGAT GTGACTCACC CAACCACAGC CACGCATCGT
TATGTTGCTG AAAAAATGTT GGAAAGCAGC AATAACTTAG AAGAGTTTCG CTTTTAA
|
|---|
| Protein sequence | MMKKTITLLT ALLPLASAVA EEPTLSPEMV SASEVVSTQE NQTYTYVRCW YRTSHSKDDA
ATDWKWAKNQ DGSDFTIDGY WWSSVSFKNM FYTNTSQNVI RQRCEETLDL ANENADITFF
AADNRYSYNH TIWSNDAAMQ PDQINKVVAL GDSLSDTGNI FNASQWRFPN PNSWFLGHFS
NGFVWTEYVA KAKNLPLYNW AVGGAAGENQ YIALTGVGEQ VSSYLTYTKL AKNYNPANTL
FTLEFGLNDF MNYNRSVPEV KADYAEALIR LTDAGAKNFM LMTLPDATKA PQFKYSTQEE
IETIRAKVLK MNEFIKAQAM YYKAQGYNIS LFDTHALFET LTSAPEEHGF VNASDPCLDI
NRSSSVDYMY THSLRSECAA SGADKFVFWD VTHPTTATHR YVAEKMLESS NNLEEFRF
|
|---|
| |