Gene VEA_000746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000746 
Symbol 
ID8559051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp859746 
End bp859991 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content49% 
IMG OID646408410 
Producthemolysin 
Protein accessionYP_003287897 
Protein GI262396044 
COG category[R] General function prediction only 
COG ID[COG3042] Putative hemolysin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATGG CTGCAACGTT GGTACTGGCT GGTTGTTCAA CTTACGAAGG TGCCACTCGC 
TCGACTGAGT ATACCTCCGT CGCAAATCCT GCAGCCGTTT ACTGTGTTCA GCAAGGTGGT
GAGTTGGATA CCGTTTCGGA AAATGGCGAA CGTGTGACTT ACTGCGTGCT GTCTGACGAT
AATCGTGTCG AGCAATGGGA ATACTATCGC GACAATCATA AAGAAAGTGA GAGTGGCGAC
TACTAA
 
Protein sequence
MAMAATLVLA GCSTYEGATR STEYTSVANP AAVYCVQQGG ELDTVSENGE RVTYCVLSDD 
NRVEQWEYYR DNHKESESGD Y