| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000736 |
|---|
| Symbol | |
|---|
| ID | 8559041 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | - |
|---|
| Start bp | 852564 |
|---|
| End bp | 853295 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 646408400 |
|---|
| Product | flagellar basal-body rod protein FlgF |
|---|
| Protein accession | YP_003287887 |
|---|
| Protein GI | 262396034 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG4787] Flagellar basal body rod protein |
|---|
| TIGRFAM ID | [TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAGCT TGTTATTTAC TGCAACGTCA GGTGCGAGTC GAGTTCTTAA GGCTCAGCAC
GTGCGTTCAA ACAACTTATC AAACGCTGAT ACTGCTGGCT TTCGAGCGGA TATGGAGCGC
GTGCGCAGTG TAGAAATGCA AGGCCCAGGT TTTGATGGTC GCACTATGGT TGTGACCAAC
TCTGCCTCAA CGCGTTTTGA TTCTGGCGAC ATTATGAAAA CGGGACGCCC GTTGGATGTC
GCCATCATGG GTGAGGGTTA TCTTGCTGTT GAAACTCCTG CGGGTAACGA AGCGTACACG
CGAGCGGGCA ATATCCAAGT CGACACTTTT GGTGCCATGA CCATCAACGG TTTTCCTGTT
CTTGGTGAAA ATGGGCCTTT GGTTGTGCCT GATTATCAAA AGATTGAAAT CAGCGAGCGT
GGTCAAGTAT CCGTGATTCC GCCAGGTGGT GGCGCAGAAA TCGTCGCGGG AACGTTGAAG
TTGGTTAAAC CAGAAATGAA CCAACTTCAA AAAGAGAGTG ACAGCCTACT GCACAGTGTA
GATGGCGTGC CATTCGCTGC CGATGAAACG GTGCAACTTT CTCCTGAGCA CATTGAGGGC
AGTAACGTAT CTGCCATTGA TGAGTTGATT AGCGTGATGT CGTTAACGCG TAACTTCGAG
ATGCAAGTTC GCATGATGAA AACGGCCGAG ACGTTGGCAC AAGCTGGTAA TAAATTAATG
GCGGCGAGAT AA
|
|---|
| Protein sequence | MDSLLFTATS GASRVLKAQH VRSNNLSNAD TAGFRADMER VRSVEMQGPG FDGRTMVVTN
SASTRFDSGD IMKTGRPLDV AIMGEGYLAV ETPAGNEAYT RAGNIQVDTF GAMTINGFPV
LGENGPLVVP DYQKIEISER GQVSVIPPGG GAEIVAGTLK LVKPEMNQLQ KESDSLLHSV
DGVPFAADET VQLSPEHIEG SNVSAIDELI SVMSLTRNFE MQVRMMKTAE TLAQAGNKLM
AAR
|
|---|
| |