Gene VEA_000716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000716 
Symbol 
ID8559021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand- 
Start bp832724 
End bp833251 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content46% 
IMG OID646408380 
Producttranscriptional regulator 
Protein accessionYP_003287867 
Protein GI262396014 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.421465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAAGC GACAACAAAC CAGAGACAAA ATCCTAAAAG CCGCGTGGGC ATCTTTTGCT 
CAGAATGGCT ATGACATGAC GACCACAAGG CAGATTGCGA GAGAAGCAGG AGTCGCCGAT 
GGTACGGTGT TCAGCCACTT CCCGACCAAA CTGTCGATTT TGCGCGAAGG GATGCTGACA 
CAACTGCAAC AGATCAGCCA AGAGACGCTA GTCAGTGTGG AAGGTAAGAC AGCTATCGAC 
ATTGGTTTGG CGTTGACGGA GAAATACTAT CGCTACTATT TTGCGAACGT CGAGCTGAGC 
CGAGCCTTGT TGAAAGAGGT GATTTGGGAT TTGGATTATT ACCAGTCGTT TAACCAAGAG 
TTGTTTCAAT CTGCGAGCGT AAGTTCTGTT CTTGAAGACA AAATGCCGTT GATTTTTGAC 
TGCTACTTCA TGACGCTAAT AGCACATTTA AGCCGAGCAG AACCAGATGT TGAAGCCGCG 
CTTACAGATC TTCATGCTAA GTTTCAGCAA ATCATTGCGA CTACATAA
 
Protein sequence
MTKRQQTRDK ILKAAWASFA QNGYDMTTTR QIAREAGVAD GTVFSHFPTK LSILREGMLT 
QLQQISQETL VSVEGKTAID IGLALTEKYY RYYFANVELS RALLKEVIWD LDYYQSFNQE 
LFQSASVSSV LEDKMPLIFD CYFMTLIAHL SRAEPDVEAA LTDLHAKFQQ IIATT