Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000690 |
Symbol | |
ID | 8558995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 798800 |
End bp | 800467 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 646408354 |
Product | ABC-type uncharacterized transport system component |
Protein accession | YP_003287841 |
Protein GI | 262395988 |
COG category | [R] General function prediction only |
COG ID | [COG4533] ABC-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACGATG TCAATCTTAG GTATCTGGAT CTACTGTTAA AGCACTTTGA ACCTCATCAA TATCACTTCG TTACGCTGTC TGAGCTTGAA GTGGTAATTT GTACGTCAAG GCGCAATGTT TCTATTGTGA TGAAAAAGCT TGCCTCTTAC GGTTGGGTAG ATTGGAAACC TGCAATTGGC AGAAGTAACG CTAGTCGTCT GAATATTACT ATTTCCCTTC AACAAGCGAT GACCGAATTT TTGGTTGAGG AGCTTGGTCG GGGAAGAATG AACTCGATAA CAAAACTTAT CGATTGGTTC GGCCAAAGTG CTGTCAGGGC GCTGACGATT GCCTCTGAAA AAGTGAACCA GTTGAATGAG TCAAATAACG CTATTTTGAT CTCCTCTTAT CCTTGGGTGT CTAAGGTCGA TCCTGCGAAC ACTTATCGTC ATACTGAACT GCATGTGGCG AAAAGTGTTT ATGATGTTTT GCTGACTCAA AATTCCAATG GTGGCATTGA GCCTTCGCTA GCACATGAGT GGAAAATGGA AGGCAATGTG ATGACGTTAT GGTTGAGACC TGGAATATAT CGTCACGATG GCGAACTTCT CAGCATACAA GATGTTGTTT GGAGCATAGA AAGACTTAAG GAAATAAAAG GACCAGTACA CGAGCTCTGG CAATGTATTG ACAGTGTGAT TGCCGAAACA TCGAGCTGCT TAAAAATTAC ATTGAAACAT CCGAACATGT TTTTTCCATA TATGCTAGCC ACTCCTCACG CTTCTATTCT TTGTCGAGAT GTTGTTTCTT TCGGTTCTGG TTATTCTTAC CACATAGGCA CCGGACCATT TAAAATCAGT GGTTGGAACC AAGAGAGTAT GATTCTTCAA GCACACAAAG AATATTTTTC AGCGCGCGCA TTGTTGGACC AAATTACGCT GTCTCATGGT GATGTTAAGA CCCTGAATAT GTTGAGTTTT AACCAAACCT CTGATCACGT TGAAGTGGAA AAAATCAGCG CATTTTCATA TTTGACCTAT CGTGAACGCG CGGACTCTAA TCTCGCAAAA GAAGATTGGC ATCAACTCGC CGATTACATC AATGCGCAAA AGAGAATCTA TGAGGCGCAA AGTGCCGTTG ACAGCATTCA GTTAGCGACT CAAGAGCAAG ATTTACTAAT AGCAGAGGCT ATTGTGACGC CTAAGCTACA AGGTAAAGTA GCGCTAGCTG AGCCAATCTG GACGATACCA AGTTTAATTC GTCACTCTGA GTGGTTGCAC CGAGTGATTC GGGCGACGGG ATTAGAGCTA GAGATCGTCA TTATTGATGA CATTAGTTTT CCTGAAGTCG TATCACATCG AGCGGACTTG CTCCTAATTG AAGAAGTTAT GGAAGCGCCG TTTGAGTATG GCGTATTTGA ATGGCTATCG ATAGCAACAG GTTTGCGTTT TAGTTTTGAT CAAAGCCAGA TGTTGATCCA TCGAGAAAAC CTTCGCGAAG CCATGACAAA TGCTCAATCT TTACAATCTC TTTTAGGCGT AGAAAAAGCG TTACGAGAGC AGTATCTTTA TTTGCCTTTA TTTGTTGGCT ATGAAGAGGT GACAAAAACA CAGCAAGTGC GCGGTGTTCA GGTGAAAAAT ACGGGTTATA GCGATTTGCA TCGTCTCTGG ATCGCTCACT CTAACTAG
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Protein sequence | MNDVNLRYLD LLLKHFEPHQ YHFVTLSELE VVICTSRRNV SIVMKKLASY GWVDWKPAIG RSNASRLNIT ISLQQAMTEF LVEELGRGRM NSITKLIDWF GQSAVRALTI ASEKVNQLNE SNNAILISSY PWVSKVDPAN TYRHTELHVA KSVYDVLLTQ NSNGGIEPSL AHEWKMEGNV MTLWLRPGIY RHDGELLSIQ DVVWSIERLK EIKGPVHELW QCIDSVIAET SSCLKITLKH PNMFFPYMLA TPHASILCRD VVSFGSGYSY HIGTGPFKIS GWNQESMILQ AHKEYFSARA LLDQITLSHG DVKTLNMLSF NQTSDHVEVE KISAFSYLTY RERADSNLAK EDWHQLADYI NAQKRIYEAQ SAVDSIQLAT QEQDLLIAEA IVTPKLQGKV ALAEPIWTIP SLIRHSEWLH RVIRATGLEL EIVIIDDISF PEVVSHRADL LLIEEVMEAP FEYGVFEWLS IATGLRFSFD QSQMLIHREN LREAMTNAQS LQSLLGVEKA LREQYLYLPL FVGYEEVTKT QQVRGVQVKN TGYSDLHRLW IAHSN
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