Gene VEA_000690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000690 
Symbol 
ID8558995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp798800 
End bp800467 
Gene Length1668 bp 
Protein Length555 aa 
Translation table11 
GC content43% 
IMG OID646408354 
ProductABC-type uncharacterized transport system component 
Protein accessionYP_003287841 
Protein GI262395988 
COG category[R] General function prediction only 
COG ID[COG4533] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACGATG TCAATCTTAG GTATCTGGAT CTACTGTTAA AGCACTTTGA ACCTCATCAA 
TATCACTTCG TTACGCTGTC TGAGCTTGAA GTGGTAATTT GTACGTCAAG GCGCAATGTT
TCTATTGTGA TGAAAAAGCT TGCCTCTTAC GGTTGGGTAG ATTGGAAACC TGCAATTGGC
AGAAGTAACG CTAGTCGTCT GAATATTACT ATTTCCCTTC AACAAGCGAT GACCGAATTT
TTGGTTGAGG AGCTTGGTCG GGGAAGAATG AACTCGATAA CAAAACTTAT CGATTGGTTC
GGCCAAAGTG CTGTCAGGGC GCTGACGATT GCCTCTGAAA AAGTGAACCA GTTGAATGAG
TCAAATAACG CTATTTTGAT CTCCTCTTAT CCTTGGGTGT CTAAGGTCGA TCCTGCGAAC
ACTTATCGTC ATACTGAACT GCATGTGGCG AAAAGTGTTT ATGATGTTTT GCTGACTCAA
AATTCCAATG GTGGCATTGA GCCTTCGCTA GCACATGAGT GGAAAATGGA AGGCAATGTG
ATGACGTTAT GGTTGAGACC TGGAATATAT CGTCACGATG GCGAACTTCT CAGCATACAA
GATGTTGTTT GGAGCATAGA AAGACTTAAG GAAATAAAAG GACCAGTACA CGAGCTCTGG
CAATGTATTG ACAGTGTGAT TGCCGAAACA TCGAGCTGCT TAAAAATTAC ATTGAAACAT
CCGAACATGT TTTTTCCATA TATGCTAGCC ACTCCTCACG CTTCTATTCT TTGTCGAGAT
GTTGTTTCTT TCGGTTCTGG TTATTCTTAC CACATAGGCA CCGGACCATT TAAAATCAGT
GGTTGGAACC AAGAGAGTAT GATTCTTCAA GCACACAAAG AATATTTTTC AGCGCGCGCA
TTGTTGGACC AAATTACGCT GTCTCATGGT GATGTTAAGA CCCTGAATAT GTTGAGTTTT
AACCAAACCT CTGATCACGT TGAAGTGGAA AAAATCAGCG CATTTTCATA TTTGACCTAT
CGTGAACGCG CGGACTCTAA TCTCGCAAAA GAAGATTGGC ATCAACTCGC CGATTACATC
AATGCGCAAA AGAGAATCTA TGAGGCGCAA AGTGCCGTTG ACAGCATTCA GTTAGCGACT
CAAGAGCAAG ATTTACTAAT AGCAGAGGCT ATTGTGACGC CTAAGCTACA AGGTAAAGTA
GCGCTAGCTG AGCCAATCTG GACGATACCA AGTTTAATTC GTCACTCTGA GTGGTTGCAC
CGAGTGATTC GGGCGACGGG ATTAGAGCTA GAGATCGTCA TTATTGATGA CATTAGTTTT
CCTGAAGTCG TATCACATCG AGCGGACTTG CTCCTAATTG AAGAAGTTAT GGAAGCGCCG
TTTGAGTATG GCGTATTTGA ATGGCTATCG ATAGCAACAG GTTTGCGTTT TAGTTTTGAT
CAAAGCCAGA TGTTGATCCA TCGAGAAAAC CTTCGCGAAG CCATGACAAA TGCTCAATCT
TTACAATCTC TTTTAGGCGT AGAAAAAGCG TTACGAGAGC AGTATCTTTA TTTGCCTTTA
TTTGTTGGCT ATGAAGAGGT GACAAAAACA CAGCAAGTGC GCGGTGTTCA GGTGAAAAAT
ACGGGTTATA GCGATTTGCA TCGTCTCTGG ATCGCTCACT CTAACTAG
 
Protein sequence
MNDVNLRYLD LLLKHFEPHQ YHFVTLSELE VVICTSRRNV SIVMKKLASY GWVDWKPAIG 
RSNASRLNIT ISLQQAMTEF LVEELGRGRM NSITKLIDWF GQSAVRALTI ASEKVNQLNE
SNNAILISSY PWVSKVDPAN TYRHTELHVA KSVYDVLLTQ NSNGGIEPSL AHEWKMEGNV
MTLWLRPGIY RHDGELLSIQ DVVWSIERLK EIKGPVHELW QCIDSVIAET SSCLKITLKH
PNMFFPYMLA TPHASILCRD VVSFGSGYSY HIGTGPFKIS GWNQESMILQ AHKEYFSARA
LLDQITLSHG DVKTLNMLSF NQTSDHVEVE KISAFSYLTY RERADSNLAK EDWHQLADYI
NAQKRIYEAQ SAVDSIQLAT QEQDLLIAEA IVTPKLQGKV ALAEPIWTIP SLIRHSEWLH
RVIRATGLEL EIVIIDDISF PEVVSHRADL LLIEEVMEAP FEYGVFEWLS IATGLRFSFD
QSQMLIHREN LREAMTNAQS LQSLLGVEKA LREQYLYLPL FVGYEEVTKT QQVRGVQVKN
TGYSDLHRLW IAHSN