| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000687 |
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| Symbol | |
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| ID | 8558992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 795707 |
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| End bp | 796936 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646408351 |
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| Product | L-proline Glycine Betaine ABC transport ATP-binding protein proV |
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| Protein accession | YP_003287838 |
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| Protein GI | 262395985 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0700461 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAGTC CACTTATCGA AATCAGCGGT CTGTATAAAA TCTTCGGACC TAAACCCAAC
AGCGTGATAG AGCGCGTCAA GTTGGGACAT AGTAAAGAAC ACGTGCTAGC GGAAACGGGC
CACACGGTCG GGCTAAAAGA CATCAACCTC CAAATTAAAA AGGGCGAGAT TTTCGTTATC
ATGGGTTTAT CCGGTTCAGG TAAGTCCACC ATGATTCGCC ACTTCAATCG CCTAATCGAT
CCAACCATGG GACAGATTTT GGTGGAAGGG GTAGATGTAA TGCAGCTTTC TAACAAGGAG
TTAGAGCAGT TTCGTCGTCA TAAGATGTCG ATGGTGTTTC AACGTTTTGG CTTATTGCCT
CATCGCACTG TTATCGACAA CATCGCTTAC GGTTTGGAAA TTCAAGGAAT AAGTAAAGAA
GCGCGCTTAT CAAAAGCAAA CGAATGGTTG GATACCGTTG GATTAACGGG TTATGAGAAC
CAATATCCCG CTCAGCTATC AGGTGGTCAG CAGCAACGCG TAGGCCTCGC GCGAGCATTG
GCAACCAACG CCGAAATACT GTTAATGGAC GAGGCATTCT CAGCGTTGGA CCCACTGATT
CGGAGCGAAA TGCAGGATCA GTTAATAGAA CTGCAACAGC AGTTACACAA AACGATTGTT
TTTATTACTC ACGACTTAGA TGAAGCACTG CGCCTTGGCG ATCGCATTGC GATCCTTAAA
GACGGTGAGC TTGTCCAACA AGGTTCACCA GACGAAATAT TGCTGCATCC TGCCGATGAG
TACGTTGAAG CCTTTGTAAA AGACGTCAAT AGAGCGCGAG CATTGACGGT TGAGACTGTG
ATGCAGCCAC CTTCATATCG CATTGCCGCT AAAACCATTG AAGAAGCGCT CAGTGAGATG
AAACGTGTAA AACGTGATTA TGCTTATCAT GTGACCGATT CAGGCTATCA AGGCGTGATA
ACGCAACAAG GGTTACTAGA CGCGACGAAG TTAGCTCAAA CCCCAAGCTG GGATGATGAT
ATCTATGAAG AAGTGCCTAT CATCTCTCCC CATTCAGCCA TTGAGCAAAT ATTGACTGAA
ACCATGTCGT GCGAATACTC ACTGCCCGTT GTCGATGAGC ATGGTCATTT GAAAGGTGAA
TTAGAGCGTC GTACTGTTGC TGGTTTATTC GCTGATGAAG ACAGCACAAA ACGAAGCACC
TCACGTTCAA ACATCGATAA GGCCTCTTAA
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| Protein sequence | MTSPLIEISG LYKIFGPKPN SVIERVKLGH SKEHVLAETG HTVGLKDINL QIKKGEIFVI
MGLSGSGKST MIRHFNRLID PTMGQILVEG VDVMQLSNKE LEQFRRHKMS MVFQRFGLLP
HRTVIDNIAY GLEIQGISKE ARLSKANEWL DTVGLTGYEN QYPAQLSGGQ QQRVGLARAL
ATNAEILLMD EAFSALDPLI RSEMQDQLIE LQQQLHKTIV FITHDLDEAL RLGDRIAILK
DGELVQQGSP DEILLHPADE YVEAFVKDVN RARALTVETV MQPPSYRIAA KTIEEALSEM
KRVKRDYAYH VTDSGYQGVI TQQGLLDATK LAQTPSWDDD IYEEVPIISP HSAIEQILTE
TMSCEYSLPV VDEHGHLKGE LERRTVAGLF ADEDSTKRST SRSNIDKAS
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