Gene VEA_000685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000685 
Symbol 
ID8558990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp794022 
End bp794312 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content44% 
IMG OID646408349 
ProductHTH DNA-binding protein 
Protein accessionYP_003287836 
Protein GI262395983 
COG category[R] General function prediction only 
COG ID[COG1342] Predicted DNA-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGAC CAAAGATAGA AAGACGAATA TGCGGACGTG CTGCACACCA TTGTTTCAAA 
CCCAATGGCG TGCCATTTCA TCAGTTGGAG CAAGTCGCCA TATTACCAGA AGAGCTAGAA
GCACTGCGTT TGGCCGATTT AGAGGGTCTT AGCCAGCAGC AAGCTGCTGA ACAGATGGGC
GTCTCTAGAC AAACTTTTGG TAACACAGTA AAAAGTGCAA GATTGAAAGT CGCAAAAAGT
TTAGTTGAAG GTCATGCATT AGTTTTTCCG GATGAGGAGT CAAACTTATG A
 
Protein sequence
MARPKIERRI CGRAAHHCFK PNGVPFHQLE QVAILPEELE ALRLADLEGL SQQQAAEQMG 
VSRQTFGNTV KSARLKVAKS LVEGHALVFP DEESNL