| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000679 |
|---|
| Symbol | |
|---|
| ID | 8558984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | + |
|---|
| Start bp | 788740 |
|---|
| End bp | 789732 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 646408343 |
|---|
| Product | muconate cycloisomerase |
|---|
| Protein accession | YP_003287830 |
|---|
| Protein GI | 262395977 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTC ATGTAGAACC TGTCACGATT GCTATGGCGA CACCATTTCG CATCTCTCGC
GGCAGTCGGA CAGAGTGCCA CGTAGTCCTC GTGACAATTG AACATCTAGG CATGCTCGCC
CAAGGAGAAT GCACACCATA CCCACGTTAT GGTGAATCGG TTGAATCGGT GATTAAGGCG
ATTTCTCACG CCGCGCATGA ACTGCAAAGT TTGTACGCCA AAGGCGACGC TGATGTGATG
ACTCTCAAAA GCCAGCTTCA ATCGTTATTG CCCGCAGGAG CGGCAAGAAA TGCATTGGAT
TGCGCCCTTT GGCATCTTCT TGCGCTTTTG AGCCACAAGC AACAAGTTCA CGACCTCTTT
ACGTTACCCG AGGCGATTGT GACGGCGATG ACGGTTTCTA TCGACACGCC GCAAGCGATG
GCAAAACAGG CGCAAGCTTA CCTTAGCCAA GGCGCAAAAC TGCTTAAGGT AAAACTGGAT
GGTGAAAACG TGATTGAGCG CGTTGCAGCA GTACGCGATG CCGCGCCGCA CGTACAAATT
GTCTTAGATG CGAATGAAGC GTGGCAAAAC CTCGACCTCG CGACGGTATT TGATCAACTC
GAACCGTTTA ATATCATCAT GATCGAGCAA CCGCTGCCAC AAGACCGTGA TGACGTACTC
GCCAGCATTC CGCACCCCAT TCCACTTTGC GCCGATGAAA GTTGTCACAC CAGAGAGCAA
TTGCATCAAC TGCTTGGCAA ATATGAAATG GTGAACATTA AGCTAGATAA AACGGGCGGG
CTCAGTGAAG CATTATTGCT GGCCGACGAT GCAAAAAAAC TCGGTTTTAG CCTCATGTCC
GGTTGTATGT TGGGGACGTC GCTGGCAATG CGAGCTGCGT TACCTATTGC TGCTCAGGCG
AGCGTTGTCG ATCTTGATGG CCCGGTGTTG CTCGGACAAG ATATAACGCC GAGCTTAGTT
TATCGCGACG GCGAAATCGT TCTTTCCAAA TAG
|
|---|
| Protein sequence | MKIHVEPVTI AMATPFRISR GSRTECHVVL VTIEHLGMLA QGECTPYPRY GESVESVIKA
ISHAAHELQS LYAKGDADVM TLKSQLQSLL PAGAARNALD CALWHLLALL SHKQQVHDLF
TLPEAIVTAM TVSIDTPQAM AKQAQAYLSQ GAKLLKVKLD GENVIERVAA VRDAAPHVQI
VLDANEAWQN LDLATVFDQL EPFNIIMIEQ PLPQDRDDVL ASIPHPIPLC ADESCHTREQ
LHQLLGKYEM VNIKLDKTGG LSEALLLADD AKKLGFSLMS GCMLGTSLAM RAALPIAAQA
SVVDLDGPVL LGQDITPSLV YRDGEIVLSK
|
|---|
| |