| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000675 |
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| Symbol | |
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| ID | 8558980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 784706 |
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| End bp | 785137 |
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| Gene Length | 432 bp |
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| Protein Length | 143 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646408339 |
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| Product | redox-sensitive transcriptional activator soxR |
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| Protein accession | YP_003287826 |
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| Protein GI | 262395973 |
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| COG category | [K] Transcription |
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| COG ID | [COG0789] Predicted transcriptional regulators |
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| TIGRFAM ID | [TIGR01950] redox-sensitive transcriptional activator SoxR |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.27209 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAATCA GCGTAGGAGA AGTGGCAAAA CGTTCCGGAG TGAAAGTCTC TGCCCTGCAT
TTTTATGAAC AAAAAGGACT GATTTCGAGT TGGAGAAATC AAGGCAATCA GCGCCGCTAC
CACCGTAGCG TTTTGCGCCG TGTCGCGGTG ATTAAAGCGG CTCAGCAAGT GGGGTTATCG
TTAGAAGAAA TCAAACATGC GCTAGATGAG CTGCCGAAAC ATCAAGCTCC GAACAAAGAT
CAATGGGAAG TCATGGCGAG CCATTGGCAT GAACAGTTAG AACAAAAGAT TCAAAAACTC
AAAGCCTTGC AAAACGATTT GGGTGGATGC ATTGGCTGCG GATGTTTGTC TTTAGAAACC
TGCGCGCTGC GAAACCCAGA AGATGTGTTA GGCAAAGACC ACTCGGGTTC TAATTTAACG
TTAGAAGAGT AG
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| Protein sequence | MEISVGEVAK RSGVKVSALH FYEQKGLISS WRNQGNQRRY HRSVLRRVAV IKAAQQVGLS
LEEIKHALDE LPKHQAPNKD QWEVMASHWH EQLEQKIQKL KALQNDLGGC IGCGCLSLET
CALRNPEDVL GKDHSGSNLT LEE
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