| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000668 |
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| Symbol | |
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| ID | 8558973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 775686 |
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| End bp | 778838 |
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| Gene Length | 3153 bp |
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| Protein Length | 1050 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646408332 |
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| Product | RND multidrug efflux transporter |
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| Protein accession | YP_003287819 |
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| Protein GI | 262395966 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.644957 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGATA CTAAACAAAA GGGCTTAATT GCTTATTTTG CGAATAACCC CGTCGCTGCC
AACCTTTTGA TGGTGTTCAT CATCATCATG GGGGTGGTGA GTTTTCTCTT TATTCAAAGG
CAGATGTTTC CGAACATTGA GGTGAACTAC ATTGATGTTC GTGCGACTTA TCCTGGCGCT
TCTCCTCAAG AAATTGAAGA AAGCATTCTC GTTAAGGTTG AGGAATCGAT TAAAGATGTC
ACCGGGATTA AAAAAACGGT CTCAACGGCC TCTAGAGGTA GCGCGTATGT CTCTATCGAG
GTAGACGTGA ATGCTGATAT CAAGCGTGTC TTGGATGATG TAAATCAACG CATTGATACT
TTATCCAACT TACCTGCCGG TATGGAACCG ATCAATGTCT ACCAAGTTGA GTGGCGCCAA
GATGTAATCG AAATGGGGTT AGTTGGGGAC CGACCGCTTG AAGAGCTCAA ACCCATTGCT
AAGCAAGTCG AGGATGAATT ACTTCAACTC AAAAATGTCA TGTTGGTGTA TTTGAGTGCA
CCAGAGGAAG AGATAGCGAT TGAAGTTGAT CCACTCGTTC TTCGTAAATA CGACTTGACG
TTGAGCGATA TCAGCAGCGC GATCAGTCGT TATTCTGCCA ACTTTTCTGC GGGCGAAGTC
AAAACAAACT CAGGGATGAT CGCAGTAAGG ATTGAAAATC AGTACTACCG TGGTGATGAA
TTTAGGAATA TTCCTGTAAA GCTTGGCGCA AATGGTGCGA AGGTTTTACT GCAAGATATC
GCCACGATCA AAGATGGCTT TACGGAAGAA GAGCGCTACT TTGAATACTC AGGGCAAAAT
GCGATCTACA TGTCTGTTGA AGCGACTCGT GATCAGAACA TTATCCCTGT TGCCGAGTCT
GTTCGTAATT ATATCGAAGC AAAAAACAAG ACATTGCCGC AGGACGTTAA GCTCAAAGTC
TTAGTGGATA CGACCTATTA TTTAAACGGT CGTCTCGACA TGATGTTGAA AAATTTGCTG
CAAGGCGCTG CTCTAGTGGC GATTATGCTG ACAATTTTCT TGCGCTTTCG CTTGGCAATG
TGGGTAATGA TTGGGCTGCC AGTGTGTTTT CTTGGCGCGG TGATGATGAT GCCTGCATTA
GGGATCACGG TAAACATCGT ATCTCTTTTT GCCTTCATTA TGGTGCTCGG TATTGTGGTC
GATGACGCCA TCGTGATGGG AGAGAGCGCC TACAGCGAAA TTGAAGAAAA AGGTGGTGGC
GTCGAAAATG TGGTTCGCGG TGTCAAACGT GTTGCCACGC CAGCTACTTT TGGCGTTTTA
ACCACAATTG CCGTGTTTGC CCCTTTCTTG TTGTCTAGCG GTATTGACAG TGCTTTCTTC
TATGGTATCG CGGGCGTTGT GATTCTTTGT TTGATCTTCA GTTTGATTGA ATCGAAGTTA
ATCCTTCCTG CTCACCTCGC ACATACTCAC TTTAAGCCAG TTAAACCTGG TGGCTGGCGT
GACCGATTTA ACCAACGTTT TTTTGGCTTT GTAAACGGTA CGTATCGTAA CTTTGTAACG
ACATGTACGC ATTGGCGCTG GACCGTGTTT GCTGTGTTTT GCGGTTTACT GCTGATCAGT
GCGGCTTTGG TCAACGCGAA TTATGTTCGG GTGATCCCTA ACCCTAAAGT GCCTACTGAT
TATCCTGCGA TCACTATTGA AATGAACGAT ACCGTTTCAA GTGAGCAAAC AATCAGCGCT
CTTAAGACCA TCGAACGTGT GATGCAAAAA ATTGAATCAG AGACCATCGC AGAACATGGT
CAAGGCATGA TTCGTGATGT GCTTTCGTAC AACCGAAGCC GCACCGAAGG CCGTGTTTTA
GTGCCATTGG TTGATGAGGA ATTACGCCCG TTCAATACAT TTGAACTTGC TCGACGTTGG
CGTGAAGCTA TGCCAGTTAT TCCTGGAATG AAGAGCATCA AAATCCGCGA GCAGAGCGCG
GGTGGCGGTG ACAGAGATGA GTTTGGTTAC TTGCTGTTTG GTTCTAATAT TAATGAATTG
AACGAGGCTG GGCGTTACTT GATAGAGCGT TTACAGCAGG AAGAAGGGTT ATACGATATT
TCATCTTCTA TTGATTCAGG AAGCAAAGAA GTGCTCCTTT CTCTTGCGCC TGTAGCGTAC
GATCTCGGAC TGGATCTCAC CATGATCGCA GAGCAAGTGG GTGGCAGCTT CTACGGTGGT
GAAGCACAGC GTCTTATTCG TGATGGTGAA GAAATCAAAG TTATGGTGCG TTACCCGCAA
CTGACACGTG AAGCATTTTC ATCATTACGT TACGCTGTGA TTACCACGCC AGCAGGTAAG
AAGGTCATGC TGGGTGATGT GGTGAAGATC AACGAGCAGC CGGGCGTGAG TAGCATTCGA
CGTGAAGGCG GGTATCAAAC CGTTTATGTC TATGGTTCGA TAGACGAAGA ATTGGTTGAA
CCTCAAGAAG CCGTGAAGGT CATCGACGAC AATATCTTAC CGGACATGAA GCAAGTCTTC
CCGAGTGTGA AAACGGAATT GGGTGGTGAT ATTGAAGAGC AAGCAGCGCA GCGTAATGAA
CAGATTCTGT TCTTTATTGC AGGCATGATC ATCGTCTACA TCTTGTTAGC CGTACCGTTA
AAAAGTTACA CCCAACCTTT GATTGTAATG TCAGTCATTC CATTTAGTCT GACGGGGGCG
ATTTGGGGCC ACTTCTGGCT AGGTTTGGAT ATCAGTATGA TGTCGACATT TGGTTTGATC
GCCGCTGCTG GCGTGGTTAT CAACGACTCT CTAGTTATGA CAGATTACGT AAACCAAGTG
AGAGAAAAGG GTATGAACAT CAAACAAGCG GTGGTTGAAG CGGGCTGTGC ACGCTTTCGA
GCGATCACGC TCACCTCAAT AACGACGTTT GCGGGTGTAT TGCCGATTAT GTTTGAAACG
AGCTTGCAGG CGCGTTTTGT CATACCAATG GCTGTAGCTT TGGGCTTTGC GGTGTTGTAC
GCAACGGTTC TGACTTTAGT GCTGGTGCCT TGTTTGTATT TAATGCTTGA AGATATTAAA
AATATTTTCA GATCGATTAA GGGGTTTGTT CATCGCTTTA TCAATCGTTT CAGAAAGTCG
CCAGTGACGT CGAGCGTTGA AGTAAATACA TAG
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| Protein sequence | MEDTKQKGLI AYFANNPVAA NLLMVFIIIM GVVSFLFIQR QMFPNIEVNY IDVRATYPGA
SPQEIEESIL VKVEESIKDV TGIKKTVSTA SRGSAYVSIE VDVNADIKRV LDDVNQRIDT
LSNLPAGMEP INVYQVEWRQ DVIEMGLVGD RPLEELKPIA KQVEDELLQL KNVMLVYLSA
PEEEIAIEVD PLVLRKYDLT LSDISSAISR YSANFSAGEV KTNSGMIAVR IENQYYRGDE
FRNIPVKLGA NGAKVLLQDI ATIKDGFTEE ERYFEYSGQN AIYMSVEATR DQNIIPVAES
VRNYIEAKNK TLPQDVKLKV LVDTTYYLNG RLDMMLKNLL QGAALVAIML TIFLRFRLAM
WVMIGLPVCF LGAVMMMPAL GITVNIVSLF AFIMVLGIVV DDAIVMGESA YSEIEEKGGG
VENVVRGVKR VATPATFGVL TTIAVFAPFL LSSGIDSAFF YGIAGVVILC LIFSLIESKL
ILPAHLAHTH FKPVKPGGWR DRFNQRFFGF VNGTYRNFVT TCTHWRWTVF AVFCGLLLIS
AALVNANYVR VIPNPKVPTD YPAITIEMND TVSSEQTISA LKTIERVMQK IESETIAEHG
QGMIRDVLSY NRSRTEGRVL VPLVDEELRP FNTFELARRW REAMPVIPGM KSIKIREQSA
GGGDRDEFGY LLFGSNINEL NEAGRYLIER LQQEEGLYDI SSSIDSGSKE VLLSLAPVAY
DLGLDLTMIA EQVGGSFYGG EAQRLIRDGE EIKVMVRYPQ LTREAFSSLR YAVITTPAGK
KVMLGDVVKI NEQPGVSSIR REGGYQTVYV YGSIDEELVE PQEAVKVIDD NILPDMKQVF
PSVKTELGGD IEEQAAQRNE QILFFIAGMI IVYILLAVPL KSYTQPLIVM SVIPFSLTGA
IWGHFWLGLD ISMMSTFGLI AAAGVVINDS LVMTDYVNQV REKGMNIKQA VVEAGCARFR
AITLTSITTF AGVLPIMFET SLQARFVIPM AVALGFAVLY ATVLTLVLVP CLYLMLEDIK
NIFRSIKGFV HRFINRFRKS PVTSSVEVNT
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