| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000655 |
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| Symbol | |
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| ID | 8558960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 758771 |
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| End bp | 761833 |
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| Gene Length | 3063 bp |
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| Protein Length | 1020 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 646408319 |
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| Product | transporter AcrB/D/F family |
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| Protein accession | YP_003287806 |
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| Protein GI | 262395953 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.955615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAATT TAGCTGAATT CGCGATTCGC CAACGTAAGT TCGTTCTGTT CTTTATCGTA
TTGAGCGTGA TCGCTGGCAT CTATTCTTAC TTCGACTTAG GCAAGTTGGA AGACCCGAGC
TTTACGGTAA AAACTGCGGT AGTCGTGACC CTTTATCCGG GTGCATCTGC CGAAGAAGTC
GAACACCAAG TCACCGATAC CGTGGAAACC AAATTGCAGG AAATGGCGGA GTTAGATCGC
TTGCGCTCAT TGTCTCGCCC CGGTTTATCT ATGGTCTTTG TTGACCTCAA AGAGAGCCTT
AATTCCAAAG CACTTCCGCA GGAATGGGAC TTATTGAGAC GCAAAGTGGA CGATGTAAAA
CTACAGCTGC CTTCCAGTGC GCAGATCAGC GTAGTACAAG ACGAGTTCTC TGAAGTCTAC
GGCATGCTTT TCTCTATCCA CAGCACAGAT GCTGCACCAG AAGAGTTGCG TCGCTACGCC
GAAGAGCTGC AACGCCAAAT CAAAGCCGTC GACGGCATCA AAAAGATCGA GCTACACGGC
ATTCAACCTC GCGTTGTACA TATCGATATG CCAGACGAGC GCTTGGCTCA ATATGGTTTG
TCGATCGCAC AAGTTTGGAA CCAACTGAGC ACACAAAACA GCACGTTCGA AGCGGGAAAA
TTCGATGCAG GTACAGAGCG TATTCGTATT GCGCAAACCA GTGAGTTTCA GTCTCTAGAA
GACATTCGCA ATTTAATCAT CAATGGTGGC ACCGGCGAGT TTGGCTCGGG GTTGATTCGT
CTTGGTGACA TCGCCGACAT CACCATGGGG TATCAAACAC CAGCATTGGC AGAAAACCGC
TACAACGGAG AGCCCGCTGT CACCTTGGCT GTGAGCCCAG TTCAAGGCAT TAACGTGGTG
TCACTTGGCG ATACGATTCA AGACATCATC GCTAACTACC AGGCAACGCT GCCGCTGGGT
GTCGACATCT CGACCGTTGC TTATCAACCT GAAGAAGTAC AAAAGTCTAT CGACGACTTT
GTTGGCAACC TGCTTGAAAG TGTCGCGATT GTTTTTGTGG TGTTGTTGGT TTTCATGGGC
TTTAAGAGTG CAACCATCGT TGGCGCAAGC TTGCTCCTGA CGATTTTGCT CACGCTTGTA
TACATGAACA TCGCCAGCAT CGATTTGCAC CGTGTCTCGC TAGGTACGTT TATTCTCGCA
CTGGGCATGT TGGTGGATAA CGCCATTGTG ATCACCGATA TGATGATCGC CAAGCTCAAC
AAAGGTATCG AGCGAACTCG CGCCGCGATT GATTCCGTCA AAGAAACCGC TGTGCCACTT
TTAGGCGCAA CTGTCATCGC GATTATGGGC GCAAGCCCAG TGTTGTTCTC CAAAACCGAC
TCCGCCGAGT TTGCAAGCTC TGTGTTCTAC ATTGTGGCAT CGTCACTGTT GCTTTCATGG
ATCGTCGCGA TGACGTTTAC GGTATTAATG GCGTGGATGT TCATCAAGCC AAAAGCTAAC
AGCGAAGAGA CCAAACCGAG CCGTTATAAA CAGTTGGTAT TCTGGACGGT GGACAACCCG
CGTAAAGCAT TAGCCGCTTT GGTTCCGTTA ATTTTAGTCA CCGCCGTGGC AATCCCGTAT
GTGGCCGTGA ACTTTATTCC TCAGTCGGAT CGTTCAATTG TGTTTCTCGA TTACTGGCTA
CCCAATGGTG CCAAGATTGA ACAAACCTCG GCAGACATGC GCAAAGTTGA AGAATGGTTG
GTCGCACAAC CAGAAGTGGA AAGTATCTCT AGCTATGTCG GCACCAGTGC ACCTCGCTTC
TCGGTAACGG TAGAGCCTGA GCCGCTCGAC CCTGCCTACG GCCAGATTCT GATCAACACT
AAAGACTACG AGAGCATCAG TCACTTGGTG ACGCGTGGGG ATGATTGGCT GAAAAAGGCA
TTTCCAGATG CCGAACCTCG CTTTCGAGCG CTGAAGCTGG CAACCAAAGA TAAGTTCGCG
GTTGAGGTGC GTTTTTCTGG TCCGGATGAA ACCGTATTAC ATCAACTAGC GGCAGAAGCG
AAAACGATTT TTGCTTCAAA CCCTGATGCA AAATACACTC GCGATGATTG GCGCCAAGAA
AGCAAAGTGC TCAAGCCGAT TCTAAACCAA GACAAAATGC GTCAAGCAGG CATTAACCGC
GCCGATGTCG CTTTCGCGCT AAAACGTGCA TCAGACGGCA TGCCGCTCGG ACAAATGAAC
CTGAATGATG AGTTGATTCC AATTCAGTTA CGTGGCACAT CGCAAAACAT GGCGTCACTA
GAAACGCTAC CTGTGCGCTC GCTACTTGGC TTTAACAGCG TTCCGCTTGG TCAAGTGGTG
GATGGATTCG AACTGGTCAC CGAAGAGAGC ATGATTTGGC GACGCGACCG CGTGAAAACC
ATCACGGTTC AAGCGGGTGT GAGCCGAGAC TCCACACCAG CGAACGTTAG AAATGCCATT
AAAGATCAGG TTGAATCTAT CCAACTTCCG GCGGGTTATA GCATGGAATG GGGCGGCGAA
TATTACGATG AAGACAAAGC GGTCACCGAC ATCATGAAGC AGCAACCAAA AGCAATGCTG
ATCATGGTGA TCATCCTAGT TGCGATGTTC AACGGCTTTA AGCAGCCAAT CATCATCCTC
GCAACGCTAC CACTGGCAGC ATCAGGGGCT GTGTTTGCTC TGCTTGGATT CGATAAACCA
TTTGGCTTTA TGGCGCTGAT CGGAGCTATC ACACTGACCG GGATGATCAT CAAAAATGGC
ATCGTACTAA TGGATCAAAT TGAGCTCGAA CGCGCAAATG GCATGAGCTT GTCTGACGCC
ATTAAAGAAG CCACGGTCAA CCGTACTATG GCAATTTCTA TGGGTGCGTT AACGACCGCG
CTCGGCATGA TCCCGCTGCT GTCAGATCTG CTGTTTGACC AAATGGCGGC AACCATCATC
GGAGGCTTGG CTGCCGCAAC CATATTGTCA CTGTTTGTCA TGCCTGCGCT GTATCGCCTT
GCTTACAAAG AAAAAGCACC ATCCACACAA ACCAACGCTG AGCTAGAGGA GGCGTCATCG
TGA
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| Protein sequence | MINLAEFAIR QRKFVLFFIV LSVIAGIYSY FDLGKLEDPS FTVKTAVVVT LYPGASAEEV
EHQVTDTVET KLQEMAELDR LRSLSRPGLS MVFVDLKESL NSKALPQEWD LLRRKVDDVK
LQLPSSAQIS VVQDEFSEVY GMLFSIHSTD AAPEELRRYA EELQRQIKAV DGIKKIELHG
IQPRVVHIDM PDERLAQYGL SIAQVWNQLS TQNSTFEAGK FDAGTERIRI AQTSEFQSLE
DIRNLIINGG TGEFGSGLIR LGDIADITMG YQTPALAENR YNGEPAVTLA VSPVQGINVV
SLGDTIQDII ANYQATLPLG VDISTVAYQP EEVQKSIDDF VGNLLESVAI VFVVLLVFMG
FKSATIVGAS LLLTILLTLV YMNIASIDLH RVSLGTFILA LGMLVDNAIV ITDMMIAKLN
KGIERTRAAI DSVKETAVPL LGATVIAIMG ASPVLFSKTD SAEFASSVFY IVASSLLLSW
IVAMTFTVLM AWMFIKPKAN SEETKPSRYK QLVFWTVDNP RKALAALVPL ILVTAVAIPY
VAVNFIPQSD RSIVFLDYWL PNGAKIEQTS ADMRKVEEWL VAQPEVESIS SYVGTSAPRF
SVTVEPEPLD PAYGQILINT KDYESISHLV TRGDDWLKKA FPDAEPRFRA LKLATKDKFA
VEVRFSGPDE TVLHQLAAEA KTIFASNPDA KYTRDDWRQE SKVLKPILNQ DKMRQAGINR
ADVAFALKRA SDGMPLGQMN LNDELIPIQL RGTSQNMASL ETLPVRSLLG FNSVPLGQVV
DGFELVTEES MIWRRDRVKT ITVQAGVSRD STPANVRNAI KDQVESIQLP AGYSMEWGGE
YYDEDKAVTD IMKQQPKAML IMVIILVAMF NGFKQPIIIL ATLPLAASGA VFALLGFDKP
FGFMALIGAI TLTGMIIKNG IVLMDQIELE RANGMSLSDA IKEATVNRTM AISMGALTTA
LGMIPLLSDL LFDQMAATII GGLAAATILS LFVMPALYRL AYKEKAPSTQ TNAELEEASS
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