Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000653 |
Symbol | |
ID | 8558958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | + |
Start bp | 756692 |
End bp | 757573 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 646408317 |
Product | transcriptional regulator LysR family |
Protein accession | YP_003287804 |
Protein GI | 262395951 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAATTG ACGATCTAAA ACTGTTCACC AAAGTCGTCC AACTTGGTAG CTTTACAGCG GCAGCCAATG CTTTGGACTT GCCACGAGCA AATGTTAGCC GACGCATTGG AGAACTGGAA CGTTACCTCG GAACGCAACT TTTTCACCGC ACCACTCGCA GCCTTTCGCT GACAAACAAA GGCGATGCCT ACTACCAAGA TCTGCAAAAA GTGCTCACCT TGCTTGATTC GGCAAACCAG CAAGCCAGTA ACGAAAGCAT CGAGGTCAGA GGCAAAATCA AACTTGGCCT TCTGCCAGAA ACCTATGAAC CTCTTCAACC CATTTTGTTT GAATTTCAGG ATCAATACCC GCAGGTTGAG CTCGACATTC GCAATATCAA CAATGGCTTT ATTGATATGT TTCAGCAGGG GTTGGACATC GCGCTGCACG GCGGCATGCT GTTTGATTCA GACATTGTCG CCAGAAAGAT CTTAACGCTA GACCGATGTG TCGTTGCCTC ACCGAACTAT CTTCAAACTC ACGGCACGCC CGCTACATTA GAAGAGTTGA GTGATCATCA GTGCATTTGT TTTCGTTGGC CAAATGGCAA TGTCGACAAC CTTTGGCATT TTCAGGAACA AAACGTAGCG CTCAAACCGA AACTCATTTC CAACAACATC GGCTTTATCA AAAGCTCCAC AGTGCTTGAC CGCGGCATCA GTTATATCCC AAAACTGTTG GTAAAAAATG AGCTCGAATC CGGTGCATTG GTGCAAGTAT TGTCTCAATA TGCCGTCACA GAAGAAACGG GGTGGTTACT CTACCCTAAG CCGAAAACGC TGAACCAAGC TAGCCGGTTA CTTATTGAAC ATTTGTGCAA TAAAATCCCA AAACTTTTGT AG
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Protein sequence | MKIDDLKLFT KVVQLGSFTA AANALDLPRA NVSRRIGELE RYLGTQLFHR TTRSLSLTNK GDAYYQDLQK VLTLLDSANQ QASNESIEVR GKIKLGLLPE TYEPLQPILF EFQDQYPQVE LDIRNINNGF IDMFQQGLDI ALHGGMLFDS DIVARKILTL DRCVVASPNY LQTHGTPATL EELSDHQCIC FRWPNGNVDN LWHFQEQNVA LKPKLISNNI GFIKSSTVLD RGISYIPKLL VKNELESGAL VQVLSQYAVT EETGWLLYPK PKTLNQASRL LIEHLCNKIP KLL
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