Gene VEA_000653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000653 
Symbol 
ID8558958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp756692 
End bp757573 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content46% 
IMG OID646408317 
Producttranscriptional regulator LysR family 
Protein accessionYP_003287804 
Protein GI262395951 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAATTG ACGATCTAAA ACTGTTCACC AAAGTCGTCC AACTTGGTAG CTTTACAGCG 
GCAGCCAATG CTTTGGACTT GCCACGAGCA AATGTTAGCC GACGCATTGG AGAACTGGAA
CGTTACCTCG GAACGCAACT TTTTCACCGC ACCACTCGCA GCCTTTCGCT GACAAACAAA
GGCGATGCCT ACTACCAAGA TCTGCAAAAA GTGCTCACCT TGCTTGATTC GGCAAACCAG
CAAGCCAGTA ACGAAAGCAT CGAGGTCAGA GGCAAAATCA AACTTGGCCT TCTGCCAGAA
ACCTATGAAC CTCTTCAACC CATTTTGTTT GAATTTCAGG ATCAATACCC GCAGGTTGAG
CTCGACATTC GCAATATCAA CAATGGCTTT ATTGATATGT TTCAGCAGGG GTTGGACATC
GCGCTGCACG GCGGCATGCT GTTTGATTCA GACATTGTCG CCAGAAAGAT CTTAACGCTA
GACCGATGTG TCGTTGCCTC ACCGAACTAT CTTCAAACTC ACGGCACGCC CGCTACATTA
GAAGAGTTGA GTGATCATCA GTGCATTTGT TTTCGTTGGC CAAATGGCAA TGTCGACAAC
CTTTGGCATT TTCAGGAACA AAACGTAGCG CTCAAACCGA AACTCATTTC CAACAACATC
GGCTTTATCA AAAGCTCCAC AGTGCTTGAC CGCGGCATCA GTTATATCCC AAAACTGTTG
GTAAAAAATG AGCTCGAATC CGGTGCATTG GTGCAAGTAT TGTCTCAATA TGCCGTCACA
GAAGAAACGG GGTGGTTACT CTACCCTAAG CCGAAAACGC TGAACCAAGC TAGCCGGTTA
CTTATTGAAC ATTTGTGCAA TAAAATCCCA AAACTTTTGT AG
 
Protein sequence
MKIDDLKLFT KVVQLGSFTA AANALDLPRA NVSRRIGELE RYLGTQLFHR TTRSLSLTNK 
GDAYYQDLQK VLTLLDSANQ QASNESIEVR GKIKLGLLPE TYEPLQPILF EFQDQYPQVE
LDIRNINNGF IDMFQQGLDI ALHGGMLFDS DIVARKILTL DRCVVASPNY LQTHGTPATL
EELSDHQCIC FRWPNGNVDN LWHFQEQNVA LKPKLISNNI GFIKSSTVLD RGISYIPKLL
VKNELESGAL VQVLSQYAVT EETGWLLYPK PKTLNQASRL LIEHLCNKIP KLL