| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000634 |
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| Symbol | |
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| ID | 8558939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 736301 |
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| End bp | 737314 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646408298 |
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| Product | TRAP-type C4-dicarboxylate transport system component |
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| Protein accession | YP_003287785 |
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| Protein GI | 262395932 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCGA TGAAACACAG CTACCTAACG AGTGCCGTAC TGATCGCTGC CAGCTTTGCC
ACCAGCAATG TTTATGCAGA AACGTGGAAA TTCGCTCTAG AAGAAGTCAA AGGCTCGGTG
CAAGATGCTT ATGCGCAAGA GTTTAAAAAG CGCATCGAAA ATGCAACCGA TGGCGACGTC
ACAGTGGAAG TCTATCCATA CGGCACATTA GGTCAGTCAG AAGATCTTAC CGAGCTTACT
GCGAACGGTA TTATCCAATT TACCAACGCA TCGCCAGGTA TTTTTGGTTC ATTCGTGCCC
GAAATGCAGG TTTTCTCCAT CCCTTACCTT TTGTCGCAAG ACAATGATGT GAATAAAAAA
GTGCTGAGTT CAAGCCCTAC TATCTATGAC ACACTCGGCA AAAAGCTAGA ACAGAAAAAC
CTCAAACTTC TCACTATGTA TCCAGAAGGT GAAATGGTGT GGACGACCAA CCGTGAGATT
CGTTCTCCAA AAGATTTTGA TAACTTCAAA ATACGCGTGA TGGCATCGCC AATGCTGGTT
GAGGCTTATA AATCGTTTGG AGCCGACCCT ACGCCTTTAC CCTACTCAGA AGTCTATGGT
GCTCTGCAAC TTAAAATGAT CGATGGTCAA GTAAACCCCG TTTTTGCTAT CGAAGAAATG
AAGTTCTACG AAGTGAACGA CTACATGATC TGGGCAGGAC AACAACAATT TACTACGACT
GTCATTACCA ACAACAGTTG GTTCGAAACC CTCCCACAAA CCCGCCAAGA TCAGGTCAAT
AAAGTCATCG CTGGTATGAC TGACTTTATA TTTGAAAAAC AGGATGAGTT TAACCAAGAA
CGTCTTGATC AAATTAAGCA AGCAAAACCA GATATGCAGA TGATCAAACT CGACAGCGAC
GAACGTGCAG CATTTAAACA AGCCTCTATG CCAATGCGGG ACAAATACAT CGAGCTTACA
GGCGACAGCG GTAAAGCGGT GCTGAGCTCA CTGGAACAAG AGTTCAATCA ATAA
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| Protein sequence | MNPMKHSYLT SAVLIAASFA TSNVYAETWK FALEEVKGSV QDAYAQEFKK RIENATDGDV
TVEVYPYGTL GQSEDLTELT ANGIIQFTNA SPGIFGSFVP EMQVFSIPYL LSQDNDVNKK
VLSSSPTIYD TLGKKLEQKN LKLLTMYPEG EMVWTTNREI RSPKDFDNFK IRVMASPMLV
EAYKSFGADP TPLPYSEVYG ALQLKMIDGQ VNPVFAIEEM KFYEVNDYMI WAGQQQFTTT
VITNNSWFET LPQTRQDQVN KVIAGMTDFI FEKQDEFNQE RLDQIKQAKP DMQMIKLDSD
ERAAFKQASM PMRDKYIELT GDSGKAVLSS LEQEFNQ
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