| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000620 |
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| Symbol | |
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| ID | 8558925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 719526 |
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| End bp | 722405 |
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| Gene Length | 2880 bp |
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| Protein Length | 959 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646408284 |
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| Product | hypothetical protein |
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| Protein accession | YP_003287771 |
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| Protein GI | 262395918 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCGA GTTTTATTGC GCTTGCTGTC GCGTCTTGTA TTGGTCTTGC TGGATGTGGA
TCAGATTCTT CTGATGCGCC TGTGCCGGTC GACAAACCAA TTATTTCAGC CGACTTATAT
TTACGTGGTT TAAATGGGGA TTGGGGCACG GCAGAGCATG CCAAGCTAAA CTATTTGGGT
AATAACGAGT ACGAAACCGT ACTGCGCGTC GCTCGAGGTA GCAATCAGTT CAAGATTGCT
GATCCGGGTT GGCAGATCCA ATACACCTAT TTTGAGGAGC CCGCGGCGTT CGATAAAGCT
CAGGAGTACC TGCCAAAACC AGACACGAAT GAAGCGTGTA TGAACGATGA TTGTAACTCT
GAGATCACGT TTGAAGACAA AGGGTATTAC AAGTTTTCTG TGAGCTTTGC CGATGAAAGT
CGCGCGACAA TGACTGTGAC AAAAGCAACG CAAGAAGAAG CGGAAAAATA CTACTCTGAT
GCGATTCTCG ACCCTGCAAT GGTGCATGAA GGGCATCAGA GTAAAGAAGT GAAACTGTTC
GCCAATTACG ATGACTCGAG TGATACCGTG ATTTTCTCGG TGAAAGACCC AAAAGCCAAG
CAGCGTGAAT TTGGTATTTC AACGACGACA GAATTGCGTG ATGCGCTCGA CCAAGGCTTA
GTGATTAATG AACAAACAGG GCCGCGAGTG GTGTCGGGTG ATGTCGCGTT TGACGCGTTG
TTTGCGTTGA CGATGAAAGA GCTAGACCAG CTTGCTGTTT CTGAAATCAA AGACGGCAAT
TACAACTACA ACAACCCAAT CAAAGCGGAA GTTTTTGAGA CGGGCGCGAA GTGGCATTAC
GTGTGGACGC GTGATTTGGC GTACGCAGCA GACCTTTCGC TTGCATTGAT GAATCCAACT
CGCGTGCAAA ATGGTTTGAA TTTCAAATTG TCCGCTTTCC GCGACACGAC CGATCAGAAA
TACGATGGCG AGCAGATTGT GCAAGACACG GGCACTGGCG GCAGCTGGCC AATCAGTACC
GACCGCACGA CTTGGGCGCT TGGTGCAGAA CGCTTACTTT CGGCATTGGA TGGAGAAGAG
TACAACCAGT TTGCTGAGCG CGCATATAAC GCTATCAGCA ATACACTTGA AGCCGATCGC
CTGGCGGCTT TTGATGCGAA ATCTGGTTTA TACACTGGTG AGCAGTCATT CCTTGATTGG
CGTGAGCAAA CGTATTCAAT GTGGACGCCA AACGATGTCA ATGCGATTGG TAGCAGCAAA
GCGTTATCGA CAAACGTGGT TCACTACCGT GCAATTCAGC TCGCGGCTAA GTTGGCAGAG
AAGTACGATT CAACTAACGC GGTCAAATAC ACTGAATGGG CTGAGCAGTT AAAAACCGCT
ATCAACGAGC AGTTTTGGAA TGCCGAACGC GGTATGTACG TAAGTTATTT GTTTGATAAT
GGCAAAGATA TCGCGGTCGA CAAATACGAC ATGCTGGGTG AAGCGTTGGC GATCATCAGT
GGCGTGGCAA GTGATGCGCA GGCGAAACAA ATCATGGCCA ATTACCCACA CAGTGAGTTT
GGCGTGCCGG TTTATTTCCC TCAACAACCA GACGTGCCTG TGTACCATAA CCGCGCAATT
TGGCCATTTG TTACCGCGTA CAGCTTGCGC GCCGCGCATC AAACACAAAA CGTGGCTGCG
GCGAACAATG CCATTCAATC GTTGGTTCGT GGTACAGCGA CTAATTTATC CAACATGGAA
AACTTAGAGT GGCTTTCTGG TAAGTCATTC ATCATCCATA GTGATCATGG CGAAGATCCG
AGCTTGGATG GCCCAGTGAT TAACTCTCAG CGTCAGCTTT GGTCTGTGGG TGGCTACTTG
AACATGGTGG TAGAGACCCT ATTTGGCATC CATACCGAAA CAGGTAAGTT GGAAGTGAAG
CCATTTATCA CAAGTTGGGT GCGCAATAAC TTGTTGGCTC AGTCTGAACA AATCACGTTG
GAAAACTTTG CCTTCAAAGG AAAAAACTAC TCGGTAACGA TTGACTTGCC TGAAGTAAGC
AAAGATGAAA CAGGCTACTA CCCAGTTGAA AATGTCACGA TGGACGAAGA GGGGCATTTC
CACGTGACAA TGGGCGCGCT TGTGAATGTA GATAGCAGCA TTACTTTAGT TTCTGGTGTG
AAACCGTATG TGAGTGAAGA CAGCCGCGTT TATTCTCCGC AAGAGCCAAC ATTGGTGGTA
ACAAGCGTTG ATAATTCGGT TTCGATTGAC GTGACGAGCA AGTACAACGT GAACTTGTAT
CGCAATGGCG AGCTGATTCA AAAGAACGTG ATTGCTCAAT CTTATTCCGA TACGCCAACA
GGTTTTGCTT GTTATTTGGC TGAAAGCATT AACGATAAAG GCTTCCGTTC TAACCCAAGC
CAACCGGCTT GTGTCGGTGA AGAGATCCGC ATCAAACTTG ATGGCGAATA TCAGCCACTC
AAAGACAATG TCTCAGTGGT TACGGTGAGC AAAGACAGTG GCATCGTAAA GGGTGCAGAG
TCGTTTACAG CTCCTGTAAC GGGCACTTAC CAGTTCGATG CTTGGTACAA CAATAACCTA
GGACAACTTA ATACCGGCAT TACGAACACC GTGAAATTGT TAGAGGTATT GGATGATGCA
GGTAAAGTGG TTGGTCAAGG TTACTTGCAG ATGGGCCATA TTGGTGAAAA CCAAGGTATG
CGTTACTCAA CGCCAATTGA AGTGGCGTTG GAGCAGGGGA AAACCTATCA GATCGCGCTG
AAGGACCACT TCAATATGAG TTACCTCACA TCGAATGAAA CCTACATCTA CGCTGGTGGT
ATTGAGGGTG AAAAGAACGA AGCGCAAATC GCAGATATTC GAATCACACC TTTAATGTAG
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| Protein sequence | MKPSFIALAV ASCIGLAGCG SDSSDAPVPV DKPIISADLY LRGLNGDWGT AEHAKLNYLG
NNEYETVLRV ARGSNQFKIA DPGWQIQYTY FEEPAAFDKA QEYLPKPDTN EACMNDDCNS
EITFEDKGYY KFSVSFADES RATMTVTKAT QEEAEKYYSD AILDPAMVHE GHQSKEVKLF
ANYDDSSDTV IFSVKDPKAK QREFGISTTT ELRDALDQGL VINEQTGPRV VSGDVAFDAL
FALTMKELDQ LAVSEIKDGN YNYNNPIKAE VFETGAKWHY VWTRDLAYAA DLSLALMNPT
RVQNGLNFKL SAFRDTTDQK YDGEQIVQDT GTGGSWPIST DRTTWALGAE RLLSALDGEE
YNQFAERAYN AISNTLEADR LAAFDAKSGL YTGEQSFLDW REQTYSMWTP NDVNAIGSSK
ALSTNVVHYR AIQLAAKLAE KYDSTNAVKY TEWAEQLKTA INEQFWNAER GMYVSYLFDN
GKDIAVDKYD MLGEALAIIS GVASDAQAKQ IMANYPHSEF GVPVYFPQQP DVPVYHNRAI
WPFVTAYSLR AAHQTQNVAA ANNAIQSLVR GTATNLSNME NLEWLSGKSF IIHSDHGEDP
SLDGPVINSQ RQLWSVGGYL NMVVETLFGI HTETGKLEVK PFITSWVRNN LLAQSEQITL
ENFAFKGKNY SVTIDLPEVS KDETGYYPVE NVTMDEEGHF HVTMGALVNV DSSITLVSGV
KPYVSEDSRV YSPQEPTLVV TSVDNSVSID VTSKYNVNLY RNGELIQKNV IAQSYSDTPT
GFACYLAESI NDKGFRSNPS QPACVGEEIR IKLDGEYQPL KDNVSVVTVS KDSGIVKGAE
SFTAPVTGTY QFDAWYNNNL GQLNTGITNT VKLLEVLDDA GKVVGQGYLQ MGHIGENQGM
RYSTPIEVAL EQGKTYQIAL KDHFNMSYLT SNETYIYAGG IEGEKNEAQI ADIRITPLM
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