| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000583 |
|---|
| Symbol | |
|---|
| ID | 8558888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | + |
|---|
| Start bp | 679570 |
|---|
| End bp | 681225 |
|---|
| Gene Length | 1656 bp |
|---|
| Protein Length | 551 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 646408247 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003287734 |
|---|
| Protein GI | 262395881 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2194] Predicted membrane-associated, metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACAC ATAATTTGCA ACAGAAAGGT ATCTCGTACG TTACCTTTAC TTTCTTGTTG
GCATTCTATT TCGCGCTGGT TGTAAACATT CCTATTTACA AAGAGCTGAA TGGTATTTTT
TCAAGCCTAG ATAATGTCAA AATTGGTTTT ATTATTACGA TACCCATTTT CTTTCTTGCC
GCGCTCAATT TCCTTTTTAA CTTATTTAGT TGGCCTTGGG TTGGAAAACC ATTCTTTATT
ACTTTGCTCA TAATTTCGAG TATGGTTAGC TACGCAAGTT ACAACTATGG CACACTTTTC
GATTCTGGAA TGATTGCTAA TATTGCTGAA ACCGATTCGA GCGAGGCAAG CTCTTACCTG
AGTACTTATT CTGTAATCTG GACGCTACTT ATGGGGGGCG TCCCTGCGAT GATTGTCTAT
AAGGTCAAGT TGCAATCTCA GCGCCACCAA TTGCTGTATT TTTCTCTCAC GAAGTTGGTG
TCGATGTTGT CATCTCTTGC AGTAATTGCT GTTATTGCCA GTGTTTACTA CCAAGACTAT
GCATCTGTCG GTCGCAATAA CAGCTATCTG AAAAAAATCA TTATTCCCAC TCAATTCGTT
TACAGCGCGA CTGGGTATGT AAAGGAGAAA TACTTCACCA CGCCAGAGCC GTATCGCGAG
ATTGGAATCG ATGCAAAGCA GTCAGATAGC GCAGTAAAGC AAGCACAGAA CAAGCCGACA
CTACTGGTGT TTATTGTCGG AGAAACCGCT CGAACACAGA ACTACCAACT CAATGGCTAT
AAGCGAGAGA CAAACCCTTA CACCAGTAAG CTGGATGTGA TTTCATTTCA AGAGGTTGCG
TCTTGTGGCA CTGCAACTGC AGTATCTGTG CCTTGCATGT TTTCTCAGCT CACGCGAAGC
GAGTTTGAAC GGACCAAGGC AGATAACCAA GATAATGCTC TCGACATCAT GCAGCGCGCT
GGAGTTGACC TCATCTGGAA AGAAAATGAT GGCGGAGACA AAGAAGTCGC CCACAAGATC
AAGAAAATTG AAGTGAACCG AAAGCAAGCA AGTCCTCTGT GTAACGGTCA AACCTGTTAC
GATATGGCGC TGTTAGATCA CTTTGATCAA GAAGTTGCGG ATATGCACGG CAATCGCGTT
GTCGCCATGC ACCTTATAGG AAGCCATGGT CCTACCTACT TCCAGCGTTA TCCTAGAGAC
AAAGCGTTTT TCAAACCAGA CTGCCCACGT GCAGATATAG AAAACTGTAG CGTCGAACAA
ATCGTGAATA CGTACGACAA TACGATACGC TACACTGATC TTGTGTTGGC AGAAACCATC
AACAAACTCA AAGCATTAGA GTCTCAATAT AATACCGCTC TCATCTACGT ATCGGATCAT
GGTGAATCAT TAGGCGAAAA CGGATTGTTC TTACATGGCA TGCCTTACGG CCTTGCACCA
GACTTCCAAA AACGTGTTCC TTTGCTCATG TGGCTATCTT CCGGCTTTAA GCAAGTGAAA
CAAATCAACA CCGACTGTTT GTCGAATGAA GCGCAAAAGG CAGGCCAGTA CTCACATGAT
AACGTGTTCC ACTCTTTATT AGGCATTATG GATGTACAAA CCCAAGCCTA CGACGGCAAG
TTAGATATAT TCAAAGACTG CCGCACGACT TCCTAA
|
|---|
| Protein sequence | MKTHNLQQKG ISYVTFTFLL AFYFALVVNI PIYKELNGIF SSLDNVKIGF IITIPIFFLA
ALNFLFNLFS WPWVGKPFFI TLLIISSMVS YASYNYGTLF DSGMIANIAE TDSSEASSYL
STYSVIWTLL MGGVPAMIVY KVKLQSQRHQ LLYFSLTKLV SMLSSLAVIA VIASVYYQDY
ASVGRNNSYL KKIIIPTQFV YSATGYVKEK YFTTPEPYRE IGIDAKQSDS AVKQAQNKPT
LLVFIVGETA RTQNYQLNGY KRETNPYTSK LDVISFQEVA SCGTATAVSV PCMFSQLTRS
EFERTKADNQ DNALDIMQRA GVDLIWKEND GGDKEVAHKI KKIEVNRKQA SPLCNGQTCY
DMALLDHFDQ EVADMHGNRV VAMHLIGSHG PTYFQRYPRD KAFFKPDCPR ADIENCSVEQ
IVNTYDNTIR YTDLVLAETI NKLKALESQY NTALIYVSDH GESLGENGLF LHGMPYGLAP
DFQKRVPLLM WLSSGFKQVK QINTDCLSNE AQKAGQYSHD NVFHSLLGIM DVQTQAYDGK
LDIFKDCRTT S
|
|---|
| |