| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000579 |
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| Symbol | |
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| ID | 8558884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 676529 |
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| End bp | 677242 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646408243 |
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| Product | putative DNA-binding response regulator |
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| Protein accession | YP_003287730 |
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| Protein GI | 262395877 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00151616 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCAC AACAAGTCAA ACCATCTTTA ATCATTGTGG AAGACGATCC CAAATTACAA
GCTATGCTGG GAGAGTATTT TGTTGAACAA GGTTTCCAGG TCAAATGTAT CGACAACGGG
ACAGACGCAC CGGAAGCGAT TATTGACACA CAGCCAGACG TGGTTTTGTT AGATTTGATG
CTACCTGGAC AAGACGGCCT GAGCGTATGT CGTCAAATCC GTGAATGCTA CAAAGGCAAA
GTGTTGATGC TGACAGCGAG TGATGACGAC TTCGATCACG TCGCCGCATT AGAGATTGGC
GCCGATGACT TTGTTACCAA GCCAATCAAA CCTCGTGTGC TGCTGGCACG CATTCGCATG
CTATTGAGAA GAAAAGAGGC AGCCTCTACC GAGTCCGAAA ACGGTCTACA AATTGGAGTG
CTGTGTTTAA ACCGATTACG TAAATCATGC GTCATGAACC AGGAAGAAAT TGCGCTGACT
GACGGTGAGT TCGATTTATT ATGGGTTCTC GCAACACACG CAGAAAAAAC ACTCTCACGT
GAGTGGTTAA CGAAAACACT ACGTGGTATT GAGTACGACG GTACAGATCG CACCATTGAC
AACCGTATTG TGACATTGAG AAAAAAATTA GGTGATGCCT CTTGCTCTCC ACAAAAAATC
ATCACGGTTC GCGGCAAAGG CTACCTATTT ATGCCTGATG CATGGAATGA ATAA
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| Protein sequence | MNAQQVKPSL IIVEDDPKLQ AMLGEYFVEQ GFQVKCIDNG TDAPEAIIDT QPDVVLLDLM
LPGQDGLSVC RQIRECYKGK VLMLTASDDD FDHVAALEIG ADDFVTKPIK PRVLLARIRM
LLRRKEAAST ESENGLQIGV LCLNRLRKSC VMNQEEIALT DGEFDLLWVL ATHAEKTLSR
EWLTKTLRGI EYDGTDRTID NRIVTLRKKL GDASCSPQKI ITVRGKGYLF MPDAWNE
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