| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000566 |
|---|
| Symbol | |
|---|
| ID | 8558871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | + |
|---|
| Start bp | 665164 |
|---|
| End bp | 666402 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 646408230 |
|---|
| Product | cytosine/purine/uracil/thiamine/allantoin permease family protein |
|---|
| Protein accession | YP_003287717 |
|---|
| Protein GI | 262395864 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1457] Purine-cytosine permease and related proteins |
|---|
| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.113273 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGAG ACAATAACTA CAGTCTTGGA CCAGTTCCCA ACACGGCCAG AAAAGGCGTG
GCATCACTAA CCATGGTGAT GTTAGGACTC ACTTTTTTCT CCGCAAGTAT GTGGACAGGG
GGTTCTCTCG GTACTGGGCT CTCCTTTAAT GATTTTTTCC TCGCTGTTCT CATCGGTAAC
CTAATCCTCG GTATTTACAC TTCTTTCCTC GGTTACATAG GCGCTTCTAC TGGTCTCTCT
ACTCACCTTC TTGCTCGTTT CTCTTTTGGT TCTAAAGGCT CTTGGCTTCC TTCTGCTCTT
CTTGGCGGTA CTCAAGTTGG GTGGTTTGGA GTTGGTGTCG CGATGTTTGC GATTCCGGTG
CATAAAGCAA CGGGCATCGA TACCAATACT ATGATCCTTG TCTCCGGTTT GCTCATGACC
GCGACCGTTT ACTTTGGCAT CTCCGCACTG ATGGTGCTGT CAGCAATCGC CGTTCCTGCC
ATTGCGCTAC TTGGCGGTTA CTCTGTCATT GAGGCAGTAA ATAGCGTTGG CGGTATTAGC
GAACTACAAC AAGTTCAACC AACCGAGCCA CTCGATTTTT CAATAGCTCT CGCGATGGTT
GTTGGCTCTT TTGTCAGTGC TGGTACATTA ACGGCAGATT TCGTGCGCTT TGGCAAAAAG
CCGCGCAGCG CCGTGATGAT CACCATGGTG GCATTTTTCA TCGGTAACTC GTTAATGTTT
ATCTTTGGCG CGGCAGGTGC ATCCGTGACT GGTCAATCAG ACATCTCTGA AGTGATGATT
GCGCAAGGCT TATTAATTCC CGCCATCATC GTACTTGGAT TAAACATTTG GACGACTAAC
GACAACGCGC TCTACGCATC GGGTCTTGGA TTTTCCAACA TCACAGGCTT ACCAAGTAAA
TACATCTCGA TGGCGAACGG GCTTGTTGGC ACACTTTGCG CTCTCTGGCT CTACAATAAC
TTTGTTGGCT GGCTGACCTT CTTATCGTTG GCAATTCCAC CGATTGGCGG CGTGATCATC
GCTGACTTCT TCACGAACCG TAAGCGCTAC GCAAACTTTG AAGCCGCCCA GTTCCAAAGC
GTAAACTGGG CTGGCATTAT CGCTGTAGCG ATTGGCGTTG GTGCGGGACA CTTCCTTCCT
GGCGTAGTAC CGATTAACGC TGTACTTGGC GGCGCAATTA GCTTCCTGAT TCTTAATCCT
ATTCTCAACA AAAAAGCACT GGCTACACAG CCAGCGTAA
|
|---|
| Protein sequence | MAGDNNYSLG PVPNTARKGV ASLTMVMLGL TFFSASMWTG GSLGTGLSFN DFFLAVLIGN
LILGIYTSFL GYIGASTGLS THLLARFSFG SKGSWLPSAL LGGTQVGWFG VGVAMFAIPV
HKATGIDTNT MILVSGLLMT ATVYFGISAL MVLSAIAVPA IALLGGYSVI EAVNSVGGIS
ELQQVQPTEP LDFSIALAMV VGSFVSAGTL TADFVRFGKK PRSAVMITMV AFFIGNSLMF
IFGAAGASVT GQSDISEVMI AQGLLIPAII VLGLNIWTTN DNALYASGLG FSNITGLPSK
YISMANGLVG TLCALWLYNN FVGWLTFLSL AIPPIGGVII ADFFTNRKRY ANFEAAQFQS
VNWAGIIAVA IGVGAGHFLP GVVPINAVLG GAISFLILNP ILNKKALATQ PA
|
|---|
| |