Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000557 |
Symbol | |
ID | 8558862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 655430 |
End bp | 656122 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 646408221 |
Product | DNA-binding response regulator |
Protein accession | YP_003287708 |
Protein GI | 262395855 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.702579 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGGGCA ATACAATCTT ACTGGTAGAA GACGACTCTG AGATTGCTCG ATTAACCAAA ATGTACCTCG AAGCCGAAGG CTATACAGTA ATTGTTATCG ATAACGGTCA AAATGCATTA GAAACGATTA AGGAACTCAA GCCGGACCTA GTGCTGTTAG ATTTGATGTT ACCAGGAAAA AATGGCGCAG AAATATGCCA AGAGGCACGT AAATTTTATC ATGGGATTAT CATTGTTTTG ACTGCAACCG ATGATGAAAT GAGCGAGGTG AGCTTATTTA AGTTCGGTGC TGATGATTAC CTTACCAAAC CGATAAAAGG CAATATCCTT CTCGCCCGTA TTGAAGCGGC GCTGCGTCGC TATCGCCGTC AAGTTGATAC CGTTGAAGAA GAAAAGCTGA GCCGATATGG CATTAGCCTT TGTCTTCGTC GTTCCCAAGC ATTTTATTTG CAAAAAGATA TTGGTTTGAC GAGTTCTGAG TTTGAAATTT TAGAGCTCCT GATGCTGAAT GTCGATAAGC CAGTATCTCG TGAATCATGT TGCCGTCTTG CCAGAGGTAT TGAATACTGT ATTACTGATC GTTCGATTGA TATGCGTATA TCCTCACTAA GGAAGAAATT CTCTAAGGCT CATATCCATA CCGCTACCAT TAAGACCATA CGTCACCACG GCTACATGCT GACAGGTAAA TGA
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Protein sequence | MVGNTILLVE DDSEIARLTK MYLEAEGYTV IVIDNGQNAL ETIKELKPDL VLLDLMLPGK NGAEICQEAR KFYHGIIIVL TATDDEMSEV SLFKFGADDY LTKPIKGNIL LARIEAALRR YRRQVDTVEE EKLSRYGISL CLRRSQAFYL QKDIGLTSSE FEILELLMLN VDKPVSRESC CRLARGIEYC ITDRSIDMRI SSLRKKFSKA HIHTATIKTI RHHGYMLTGK
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