Gene VEA_000557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000557 
Symbol 
ID8558862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp655430 
End bp656122 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content42% 
IMG OID646408221 
ProductDNA-binding response regulator 
Protein accessionYP_003287708 
Protein GI262395855 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.702579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGGGCA ATACAATCTT ACTGGTAGAA GACGACTCTG AGATTGCTCG ATTAACCAAA 
ATGTACCTCG AAGCCGAAGG CTATACAGTA ATTGTTATCG ATAACGGTCA AAATGCATTA
GAAACGATTA AGGAACTCAA GCCGGACCTA GTGCTGTTAG ATTTGATGTT ACCAGGAAAA
AATGGCGCAG AAATATGCCA AGAGGCACGT AAATTTTATC ATGGGATTAT CATTGTTTTG
ACTGCAACCG ATGATGAAAT GAGCGAGGTG AGCTTATTTA AGTTCGGTGC TGATGATTAC
CTTACCAAAC CGATAAAAGG CAATATCCTT CTCGCCCGTA TTGAAGCGGC GCTGCGTCGC
TATCGCCGTC AAGTTGATAC CGTTGAAGAA GAAAAGCTGA GCCGATATGG CATTAGCCTT
TGTCTTCGTC GTTCCCAAGC ATTTTATTTG CAAAAAGATA TTGGTTTGAC GAGTTCTGAG
TTTGAAATTT TAGAGCTCCT GATGCTGAAT GTCGATAAGC CAGTATCTCG TGAATCATGT
TGCCGTCTTG CCAGAGGTAT TGAATACTGT ATTACTGATC GTTCGATTGA TATGCGTATA
TCCTCACTAA GGAAGAAATT CTCTAAGGCT CATATCCATA CCGCTACCAT TAAGACCATA
CGTCACCACG GCTACATGCT GACAGGTAAA TGA
 
Protein sequence
MVGNTILLVE DDSEIARLTK MYLEAEGYTV IVIDNGQNAL ETIKELKPDL VLLDLMLPGK 
NGAEICQEAR KFYHGIIIVL TATDDEMSEV SLFKFGADDY LTKPIKGNIL LARIEAALRR
YRRQVDTVEE EKLSRYGISL CLRRSQAFYL QKDIGLTSSE FEILELLMLN VDKPVSRESC
CRLARGIEYC ITDRSIDMRI SSLRKKFSKA HIHTATIKTI RHHGYMLTGK