Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000556 |
Symbol | |
ID | 8558861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 654104 |
End bp | 655426 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 646408220 |
Product | signal transduction histidine kinase |
Protein accession | YP_003287707 |
Protein GI | 262395854 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTTCCC TGTTTACTCG TCTATATGTG GGGTTAGTTA CTGGCCTTGC GCTGACTGTT GCTTTGTTTC TCTTTATGGG GGAAGAGTAC ATGCGCAAAA CAGAAGTCGG CGTTTTTTTG AGTGATGGTG CTTATTTTGT CGATCAATAC ATTGAGCAAC GAGGCACTCC GGATTCTCTC TACAAGAAGT TAACCGAAAA CGGCAAGCAA GATTTCTTTA TCTTTGATTT AACATTGGTT GAAAACTGGG ACGGATCATC GCCTTGTCGA GATTGTAAGC TACTGTACCG AATACAAGGG ATACCTGTTT ATCTTATTGA TGGCAGTACC TATGCTGCGG TATTCCCTTT ACCTAACACC TCGCAGAGTT TAGTTTTCAA AGAAAAAACG GATTTCTTTA GCCCAGATGT TGATTGGAAT GAAGATTCAG AGATTGTATT TATACTGACT CTACTTTTGG TTGTTGTGTG CAGTTTAGGC ATTATGGTTT ACATACCTGT ACGACGTCTT GACCGCCAAA TTCGGCAACT AACGGCTGCA CAACAACAAT TTGGTTATGG TGAGTTGAAT ACGAGAGTCG ATCTAAAGCA ATTTTCGCAA CCCGTGAAAG AGCTCGCCCA AGGCTTCAAC TGCATGTCTG AAGAGATTGA GAGACGCGTA CGCCAAACAC ACATCTTTAC TCAAGCTATT CCTCATGAAG TGCGCACTCC GCTGAGTCGT ATTCAGCTAG CGACGGATTT AGCTCGGCGC ACGAGTGGTG AAATGCAGGC AGAGTTACAT GACGATATTG AACGATACGT TGATGTAGTG ACGGATTTAA CGTCCGACAT CGTCATGCTG TCTCGCTTAA GTGTGAAAAA CCACTCATGG ATCGATTCTG TTGAAACCAT GGAACTGCCT CTTTGGTGTA AAAGCCGCAT GAATTACCTA GGCTTCGAGT CCGTCATGTT GAGAGCAGAA AATGAACTCG CGAACCAATT GATTCACTTT CAGCCTACTT TGGGTAACCT CGTCCTCGAT AATTTACTGC AAAACGCCAA GCGTTACGGT GAATCCTGCG TTGAGGTGAC GATTCGAATG GTAGCGGATT GCTGGAGCAT CGATATTGAG GACGATGGTC CGGGCGTACC TGAAGCGATG CGAGAAGAAG TATTTATGCC ATTTTCGCGT TTAGACAAAA GCCGCAACGC CGACGTGAAA GGCTTTGGTT TAGGGCTTGC CATCGCTACC AGTGCAGCGA GGCAATTAGG TTGGGAACTT TCTGTCGGCG AGAGTCACTT AGGCGGCGCA CGTTTTACGG TGCTTATTCC TGCCAACGAT TAG
|
Protein sequence | MFSLFTRLYV GLVTGLALTV ALFLFMGEEY MRKTEVGVFL SDGAYFVDQY IEQRGTPDSL YKKLTENGKQ DFFIFDLTLV ENWDGSSPCR DCKLLYRIQG IPVYLIDGST YAAVFPLPNT SQSLVFKEKT DFFSPDVDWN EDSEIVFILT LLLVVVCSLG IMVYIPVRRL DRQIRQLTAA QQQFGYGELN TRVDLKQFSQ PVKELAQGFN CMSEEIERRV RQTHIFTQAI PHEVRTPLSR IQLATDLARR TSGEMQAELH DDIERYVDVV TDLTSDIVML SRLSVKNHSW IDSVETMELP LWCKSRMNYL GFESVMLRAE NELANQLIHF QPTLGNLVLD NLLQNAKRYG ESCVEVTIRM VADCWSIDIE DDGPGVPEAM REEVFMPFSR LDKSRNADVK GFGLGLAIAT SAARQLGWEL SVGESHLGGA RFTVLIPAND
|
| |