Gene VEA_000556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000556 
Symbol 
ID8558861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp654104 
End bp655426 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content46% 
IMG OID646408220 
Productsignal transduction histidine kinase 
Protein accessionYP_003287707 
Protein GI262395854 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTCCC TGTTTACTCG TCTATATGTG GGGTTAGTTA CTGGCCTTGC GCTGACTGTT 
GCTTTGTTTC TCTTTATGGG GGAAGAGTAC ATGCGCAAAA CAGAAGTCGG CGTTTTTTTG
AGTGATGGTG CTTATTTTGT CGATCAATAC ATTGAGCAAC GAGGCACTCC GGATTCTCTC
TACAAGAAGT TAACCGAAAA CGGCAAGCAA GATTTCTTTA TCTTTGATTT AACATTGGTT
GAAAACTGGG ACGGATCATC GCCTTGTCGA GATTGTAAGC TACTGTACCG AATACAAGGG
ATACCTGTTT ATCTTATTGA TGGCAGTACC TATGCTGCGG TATTCCCTTT ACCTAACACC
TCGCAGAGTT TAGTTTTCAA AGAAAAAACG GATTTCTTTA GCCCAGATGT TGATTGGAAT
GAAGATTCAG AGATTGTATT TATACTGACT CTACTTTTGG TTGTTGTGTG CAGTTTAGGC
ATTATGGTTT ACATACCTGT ACGACGTCTT GACCGCCAAA TTCGGCAACT AACGGCTGCA
CAACAACAAT TTGGTTATGG TGAGTTGAAT ACGAGAGTCG ATCTAAAGCA ATTTTCGCAA
CCCGTGAAAG AGCTCGCCCA AGGCTTCAAC TGCATGTCTG AAGAGATTGA GAGACGCGTA
CGCCAAACAC ACATCTTTAC TCAAGCTATT CCTCATGAAG TGCGCACTCC GCTGAGTCGT
ATTCAGCTAG CGACGGATTT AGCTCGGCGC ACGAGTGGTG AAATGCAGGC AGAGTTACAT
GACGATATTG AACGATACGT TGATGTAGTG ACGGATTTAA CGTCCGACAT CGTCATGCTG
TCTCGCTTAA GTGTGAAAAA CCACTCATGG ATCGATTCTG TTGAAACCAT GGAACTGCCT
CTTTGGTGTA AAAGCCGCAT GAATTACCTA GGCTTCGAGT CCGTCATGTT GAGAGCAGAA
AATGAACTCG CGAACCAATT GATTCACTTT CAGCCTACTT TGGGTAACCT CGTCCTCGAT
AATTTACTGC AAAACGCCAA GCGTTACGGT GAATCCTGCG TTGAGGTGAC GATTCGAATG
GTAGCGGATT GCTGGAGCAT CGATATTGAG GACGATGGTC CGGGCGTACC TGAAGCGATG
CGAGAAGAAG TATTTATGCC ATTTTCGCGT TTAGACAAAA GCCGCAACGC CGACGTGAAA
GGCTTTGGTT TAGGGCTTGC CATCGCTACC AGTGCAGCGA GGCAATTAGG TTGGGAACTT
TCTGTCGGCG AGAGTCACTT AGGCGGCGCA CGTTTTACGG TGCTTATTCC TGCCAACGAT
TAG
 
Protein sequence
MFSLFTRLYV GLVTGLALTV ALFLFMGEEY MRKTEVGVFL SDGAYFVDQY IEQRGTPDSL 
YKKLTENGKQ DFFIFDLTLV ENWDGSSPCR DCKLLYRIQG IPVYLIDGST YAAVFPLPNT
SQSLVFKEKT DFFSPDVDWN EDSEIVFILT LLLVVVCSLG IMVYIPVRRL DRQIRQLTAA
QQQFGYGELN TRVDLKQFSQ PVKELAQGFN CMSEEIERRV RQTHIFTQAI PHEVRTPLSR
IQLATDLARR TSGEMQAELH DDIERYVDVV TDLTSDIVML SRLSVKNHSW IDSVETMELP
LWCKSRMNYL GFESVMLRAE NELANQLIHF QPTLGNLVLD NLLQNAKRYG ESCVEVTIRM
VADCWSIDIE DDGPGVPEAM REEVFMPFSR LDKSRNADVK GFGLGLAIAT SAARQLGWEL
SVGESHLGGA RFTVLIPAND