Gene VEA_000544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000544 
Symbol 
ID8558849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp642915 
End bp645401 
Gene Length2487 bp 
Protein Length828 aa 
Translation table11 
GC content43% 
IMG OID646408208 
Producthypothetical protein 
Protein accessionYP_003287695 
Protein GI262395842 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATATCCC AAGCCTCGCA TTTTATATAC TCCATAGAGA AAGCACGCCG CCAGCCTACG 
CTTCAAGCAT CAGCCGCACT TAATATAGAA GAACAAGACG GTGTTATTTC TTCCATGCAT
CAAAAATTCG TCAGTAACCC CAATACCGCT GAATATGCTG ATGAGCTGAA AGAGGCCATG
CTAGGGGTAT TATCAGGTAG GTTGGACGAG ATGGATGACC TTGGCGATTG GGCATTTCAA
CTGCTTCAAA ATATGTCGCG CTCTTTGCTA CAAAATCATC AGTGGTATGG CAGTGAGGAC
GGTATTCGAA TGCAGAATTT TATTGCTTAC CTTGCTCAGC TGTCTTTTTG GACACAGAAA
GAAGCCTGGT TGACACATCG CCTAGTTCAA GATCCTAAGA GTCGGTTGAG TCAGAGTCTG
TTTTTTCAGG CTATTGATCG ACAGCAGCAA AATTTGGATG CGTTTTTAAA TTTAGGAGGG
TCATACGATC AAGTTGATAA ACTGCTAGGC TTGTTTACGT CGCCCAGATA TCAGAGAAAT
TTGGCATCTC GTGGGCGATT AATGTCAGGG GACATGTCAC GTAGTGACTA TGAAGCGTAT
TTGAGAGAAC TCGATTTCCG TGTGCAACGC TTGCAAGTAC TCATTGATGG GTTCACGAAA
CAAACAGAGC AGTCGCTCCT AACACAAGTT CATGAACAAA AGACCAATAT TGCGATGATT
ACCTCTGGCG TTATTTTGGT TATCGTCATG CTTTGCTGGC TTGGCTTTGG CACTTGGTTT
CGGGTTAATA GCAAACTAGA TGCGATTATT CATACCTTAA CGGCGCTGAT CAACGATGAA
GAGAAACAGA CGAAAGTCAA AGTCGATGGC AGTGATGAAC TGACGATTTT CGCTCAGCAA
GTGAATCGAG TGGTTGAAGA AAAGCAGAGA CAAACAGACG AAATACTCCA TGCTAAAGAG
TCAGCAGTGT CTGCTAATCG CGCTAAATCA GTATTTCTTG CCAACATGTC GCATGAAATA
CGCACCCCCC TAAATGGTAT TATGGGCATG ACGGAGATAC TCTCTCAAAG CGAGTTATCT
TCCCATCAAC AAGAAGTCGT TGATGACATT GACTCTTCAT CCCAAACATT ACTTACCTTG
CTTAACGATA TTTTGGATCT TTCTAAAATC GAATCTGGTC GACTGGAGTT GTCGCTAGTC
GAGGCCGATA TCCGAGAGGT GGTGTACCAG TCGATGGTTT TATTTCAATC CAAAGCCACA
TCTAAACAGC TAGAGCTGGG GATTAACTTA GCTGAAAACA TTCCAACTCG AGTGATGGTT
GATGATCATC GAATCAAGCA GGTAATCACG AATCTGGTAT CGAATGCGGT CAAGTTTACC
GAAAGCGGCC ATATACGTGT TGATGTCAGT TATGACGAGT TATCTGAGAA AGAGTGCGGA
GTGCTGATGT TTAAAGTCGA AGATACCGGG ATAGGCATTG AACAAGATAA GTTAACGACG
ATTTTTGAAC CCTTTACTCA GGAAGATGAA GGGGTGTCGA GGCAGTTCGG CGGAACGGGA
CTGGGATTGG CAATTTGTCG TCAACTGGTA TCCATGATGG GAGGGCAGCT TATAGCGACA
TCCACAAAAG GAGTGGGCAC ATGCTTTGAA TTCTCTATTG AGGTTGACGT TATTCCGGTG
TTTGGCTGGC GCTCGGACGT GATAAATAAA GGGCTCTTGA TCTGCACAAA TTACGATTAC
GCTGATCAAC TTTTGAAAGA GTGTCGATTA GCAAAAATCA ATCTCTTTGG TGCGAATAAT
GTTAATGAAG TAAAAGCAAT AAACGATGAC TTTGATGTCA TATTTCTGTG CCATAGAGAC
GACTCCAATA CGGATGAAGC CTTAGATGAG TTGTCACTCA AGTATGATCT TCGTCGTGTG
ATTATTTGTC AGCATCATCT ATCCACTCCC TACGACAATG CAGAAAGAGT ACATGCTGTG
CTCACATTGC CTTTTCTTGG CAATCGATTT AAGCATGTCA TTGACGATTT AGCGAAGGTA
GAAAAAACCA TTTCAAGTGA CGCTGTCACC AATGGTATTC CAAAGTCTGA ATATCGAACG
TCGCGCTCTC ACAGGAGGAT CTTAATCGCG GAGGATAATT TGATGAATCA GAAAATAGCG
AGTTTCTTTC TGGATAAAGC AGGATATGAC TATTTGATAA CAAGCAATGG ACAAGAAGCG
TTGGAAGCCA TCACAAAGGG AGAAGAATTC GATGCAATTT TAATGGATTG TATGATGCCG
GTGATGGATG GACTGACCGC GACGAAAGAA ATTCGTCGTT GGGAAAAGAA AGCCGGGCGT
GAGAAAACGA CCATTATTGC GCTCACCGCG AGTGTTTTGG AAGAAGACAT TCACAACTGT
TTTGCTGCAG GTATGGATGC TTATTTACCT AAGCCTTATA AATCGAATCA GCTATTTGAG
CTCTTCAATG AATTAAAACT CGCCTAA
 
Protein sequence
MISQASHFIY SIEKARRQPT LQASAALNIE EQDGVISSMH QKFVSNPNTA EYADELKEAM 
LGVLSGRLDE MDDLGDWAFQ LLQNMSRSLL QNHQWYGSED GIRMQNFIAY LAQLSFWTQK
EAWLTHRLVQ DPKSRLSQSL FFQAIDRQQQ NLDAFLNLGG SYDQVDKLLG LFTSPRYQRN
LASRGRLMSG DMSRSDYEAY LRELDFRVQR LQVLIDGFTK QTEQSLLTQV HEQKTNIAMI
TSGVILVIVM LCWLGFGTWF RVNSKLDAII HTLTALINDE EKQTKVKVDG SDELTIFAQQ
VNRVVEEKQR QTDEILHAKE SAVSANRAKS VFLANMSHEI RTPLNGIMGM TEILSQSELS
SHQQEVVDDI DSSSQTLLTL LNDILDLSKI ESGRLELSLV EADIREVVYQ SMVLFQSKAT
SKQLELGINL AENIPTRVMV DDHRIKQVIT NLVSNAVKFT ESGHIRVDVS YDELSEKECG
VLMFKVEDTG IGIEQDKLTT IFEPFTQEDE GVSRQFGGTG LGLAICRQLV SMMGGQLIAT
STKGVGTCFE FSIEVDVIPV FGWRSDVINK GLLICTNYDY ADQLLKECRL AKINLFGANN
VNEVKAINDD FDVIFLCHRD DSNTDEALDE LSLKYDLRRV IICQHHLSTP YDNAERVHAV
LTLPFLGNRF KHVIDDLAKV EKTISSDAVT NGIPKSEYRT SRSHRRILIA EDNLMNQKIA
SFFLDKAGYD YLITSNGQEA LEAITKGEEF DAILMDCMMP VMDGLTATKE IRRWEKKAGR
EKTTIIALTA SVLEEDIHNC FAAGMDAYLP KPYKSNQLFE LFNELKLA