Gene VEA_000538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000538 
Symbol 
ID8558843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp639501 
End bp639821 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content40% 
IMG OID646408202 
Productexcinuclease ABC C subunit 
Protein accessionYP_003287689 
Protein GI262395836 
COG category[L] Replication, recombination and repair 
COG ID[COG2827] Predicted endonuclease containing a URI domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.559483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAAA ATACAGCGCA GCGTTGGAGT GTCTATTTGA TACGAAATAA CCGCAATGCG 
CTGTATTGCG GTGTCACAAA CAATGTTGAG CGAAGATTCA ATCAGCACCA AACGGGCAAA
GGAGCGAAAG CTTTAAAAGG AAAAGGTCCC TTGGTATTGG AGTGGTCTTC GGATTTTGAT
TCAAAGACAC TTGCCATGCG GGCTGAGTAT TATATTAAGC AACTAACAAA AGCTAAGAAA
GAGCTACTTG TTACGTCAAA AGCAAGTATT GTCGTTGATG AAAATCAGCA GATGATGTTA
GAAATGGCTT TATCGAAATA A
 
Protein sequence
MIENTAQRWS VYLIRNNRNA LYCGVTNNVE RRFNQHQTGK GAKALKGKGP LVLEWSSDFD 
SKTLAMRAEY YIKQLTKAKK ELLVTSKASI VVDENQQMML EMALSK