| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000536 |
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| Symbol | |
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| ID | 8558841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 635507 |
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| End bp | 638083 |
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| Gene Length | 2577 bp |
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| Protein Length | 858 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646408200 |
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| Product | autoinducer 2 sensor kinase/phosphatase LuxQ |
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| Protein accession | YP_003287687 |
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| Protein GI | 262395834 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACTA CATCAAAAAC AAGAAAGCGT CGCTCATTGT CGACGCTTAT TACGAAAATA
ATCATTCTCG TACTTGCTCC GATCATTTTA GGCATCTTCG TTCAGAGTTA TTACTTCTCG
AAGCAAATTA TTTGGCAAGA AGTGGATAGA ACTAAGCAAC AGACGTCAGC GCTGATTCTT
AATATTTTTG ATAGCCATTT TGCTGCGATT CAGATTCATC ACAACAGCAA CTCGAAGAGT
GATGTTGTTT TAGATTTTTA TACAGAACGG GATGAAGAAG CTCTCAATTA CTTTTTCATG
AGTATTGACC AGAGTGATCC TTCTCATACG CCAGAATTTC GCTTCCTCAC CGATCATCAA
GGCATTATTT GGGATGATGG GAATGCGCAT TTCTATGGCA TCAATAACTT GATTCTCAAT
GACCTCGCGA GCCAAGTGAC TTTTAGCAAC AATTGGTATT ACCTTCCTTC ACATACCCCA
ATGGGAACTC GCCACCTGTT ACTGCGTCGT GTACCGGTTT TACAACCTAA AACCGGTGAA
GTGATGGGGT ATTCTTACAA TGTTGTTGTT CTAGATAACA ACTTCGGGTT GATGGAAAGA
CTAAAAAACG AAGGGAACGT TGATAATGTT GTTTTGGTGG CCAACGATAC GCCACTAGCT
AGCTCACTAG TCGGAGATGA AGCGTACAAG ATATTTGATG TTCTGAAGCG GCGAGAGTCT
CAGCAAAAGC TTGACCAGTT GTTGATCATT AAAACCCCTA TCGAAGTCAA TGCTGCCACG
ACGGATTTGT GTTTACTAAC CGTGCAGGAC AATCAGAGTG TTGTGACGCT GCAAATCCAG
CACCTTTTAG CGATGCTGGC TTCGGTTATC GGGATGGTGA TGATTGCGTT GATGACCAAA
GAGTGGATTG AGAATCGAGT CGTCGAAGAG CTTGGTTCGT TGATGGCATA CACTCGTTCG
GCTCGTGAAG AAAAAGGGTT CGAACGATTT GGCGGATCGG ATATCGAGGA GTTCGATCAT
ATTGGTTCGA CACTAGAAAA CACCTTTGAA GAGCTGGAAG CGCAAAAGCG TTCATTCCGC
GATCTGTTTA ACTTTGCGTT ATCGCCGATT ATGGTGTGGT CAGAGTCTGG CGTACTCATC
CAAATCAATC CGGCAGCCCG CAAAGAATTG GTCATGGAAA ACGACATTGA AACCATGCAC
CCAGTGTTTA AAGGCTTCAA AGAAAAGTTG ATGCCGCACC TGCGAATGGC AGCTCAAGGA
GCCACATTAA CTGGCGTCAA TGTACCAATT GGAGACAAGG TATATCGCTG GAACTTATCG
CCGATTCGAG TGGATGGTGA TATCAGCGGT ATCATTGTTC AAGGTCAGGA TATTACGACG
CTTATTGAAG CGGAAAAACA AAGTAACTTG GCACGCAAAG AGGCAGAAAA ATCCGCCCAA
GCACGTGCCG ATTTTCTGGC TAAAATGAGC CATGAAATCC GAACGCCAAT CAATGGCATT
CTGGGAGTTG CTCAATTATT AAAAGACTCG GTCGAAACGG AAGAGCAGAA TAACCAAATT
GATGTACTCC GACATAGCGG TGAGCACTTA CTTGCTGTTT TGAATGATAT TTTGGATTTT
TCGAAGATTG AGCAGGGTAA GTTTAATATT CAAAAGCACC CGTTTTCTTT CACTGACACG
ATTCGAACGT TAGAAAACAT TTATCGTCCA ATTTGCGAAA ATAAAGGCGT TAACCTCGTC
ATTGAAAACA AGATTGATCC CAATGTTGAA ATCTTTACTG ACCAAGTTCG TCTGAACCAA
ATTTTATTCA ACTTAGTCAG TAACTCAGTT AAGTTTACCC CCTCGGGCAG CGTACGCTTG
CATGCTGAAC TGGAGCAGTT CTACGGCGCC GAAAATAGTG TGTTGGTAGT AGAAATTACG
GATACGGGCA TCGGCATAGA GCCTGATAAG CTCGACCAAA TGTTCGAACC TTTCGTTCAA
GAGGAAGCAA CGACCACTCG AGAATACGGT GGCAGTGGCT TGGGACTGAC CATTGTGAAA
AGCCTCGTCG ATATGCTGGA AGGTGACGTT CAAGTACGTA GTCAAAAAGG TTTGGGTACG
ACCTTTGTTA TTACAATGCC AGTGAAAGAT CGTGAGCGAG TGCTCACCCC TCTTGATTCA
AGCTTGAGAG TTAAACCTGG TGAGTTATTC GCAGAGAGTC TAAAAGTACT GTTGGTAGAA
GATAACCATA CTAATGCCTT CATTCTCAAA GCATTTTGTA ACAAGTACAA AATGCAGGTT
GATTGGGCAA AAGATGGGTT GGAAGCGATG GAGTTCTTAA AAGATCATAC TTACGATTTG
ATTTTGATGG ACAACCAACT GCCGCATCTT GGAGGAATTG AAACAACCAA AGAGATCCGA
CAGAAGCTGA AGTTAGGCAC GCCAATTTAT GCTTGTACTG CCGATACGGC GAAAGAAACC
AGTGATGCGT TTATGGAGGC GGGCGCGAAT TACGTATTGC TCAAACCGAT TAAAGAAAAT
GCGCTGCATG AAGCCTTTGT TGACTTCAAG CAGCGATTCT TAATTGAACG AACGTGA
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| Protein sequence | MTTTSKTRKR RSLSTLITKI IILVLAPIIL GIFVQSYYFS KQIIWQEVDR TKQQTSALIL
NIFDSHFAAI QIHHNSNSKS DVVLDFYTER DEEALNYFFM SIDQSDPSHT PEFRFLTDHQ
GIIWDDGNAH FYGINNLILN DLASQVTFSN NWYYLPSHTP MGTRHLLLRR VPVLQPKTGE
VMGYSYNVVV LDNNFGLMER LKNEGNVDNV VLVANDTPLA SSLVGDEAYK IFDVLKRRES
QQKLDQLLII KTPIEVNAAT TDLCLLTVQD NQSVVTLQIQ HLLAMLASVI GMVMIALMTK
EWIENRVVEE LGSLMAYTRS AREEKGFERF GGSDIEEFDH IGSTLENTFE ELEAQKRSFR
DLFNFALSPI MVWSESGVLI QINPAARKEL VMENDIETMH PVFKGFKEKL MPHLRMAAQG
ATLTGVNVPI GDKVYRWNLS PIRVDGDISG IIVQGQDITT LIEAEKQSNL ARKEAEKSAQ
ARADFLAKMS HEIRTPINGI LGVAQLLKDS VETEEQNNQI DVLRHSGEHL LAVLNDILDF
SKIEQGKFNI QKHPFSFTDT IRTLENIYRP ICENKGVNLV IENKIDPNVE IFTDQVRLNQ
ILFNLVSNSV KFTPSGSVRL HAELEQFYGA ENSVLVVEIT DTGIGIEPDK LDQMFEPFVQ
EEATTTREYG GSGLGLTIVK SLVDMLEGDV QVRSQKGLGT TFVITMPVKD RERVLTPLDS
SLRVKPGELF AESLKVLLVE DNHTNAFILK AFCNKYKMQV DWAKDGLEAM EFLKDHTYDL
ILMDNQLPHL GGIETTKEIR QKLKLGTPIY ACTADTAKET SDAFMEAGAN YVLLKPIKEN
ALHEAFVDFK QRFLIERT
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