Gene VEA_000535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000535 
Symbol 
ID8558840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp634749 
End bp635204 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content45% 
IMG OID646408199 
Productputative transcription regulator 
Protein accessionYP_003287686 
Protein GI262395833 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCAAG ACATCAACAG TTTGCGCGAC CTTTCTCTGG CTGAAAAGTT ATCTCGCGTT 
GCCCGTTTGT GGAAAATGGT TGCAGATCGC GAGTTGGAGC CTTTAAACCT GACGTACCCG
CGTTGGACTG CGTTATGGAA ACTTTATCGA ATGGGCGACA ACGTTAGTCA GAAGCATTTG
GCTGAAGCGC TTGAGATTGA GTTGGCATCG CTGATGCGCA CATTAAAGCT ATTAGAAGAG
CAATCTCTGA TCACTCGCCA TTGCAGTGAG CATGACAAGC GAGCACGCAT TGTTAGCCTT
ACAGAAGAAG GTAAAACCCT ACTCAAGCAA ATGGAGACTC GAATTCTTCA AGTACGGAGC
AAGCTACTGA CGGAAATCAA TGACCAAGAG CTTCAAAAGC TTTCATTGAT CCTAGATCAG
ATTGCTCACA ATGCACTTGA TTCACTTAGC GAATAA
 
Protein sequence
MIQDINSLRD LSLAEKLSRV ARLWKMVADR ELEPLNLTYP RWTALWKLYR MGDNVSQKHL 
AEALEIELAS LMRTLKLLEE QSLITRHCSE HDKRARIVSL TEEGKTLLKQ METRILQVRS
KLLTEINDQE LQKLSLILDQ IAHNALDSLS E