Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000530 |
Symbol | |
ID | 8558835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 630315 |
End bp | 630770 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 646408194 |
Product | transcriptional regulator |
Protein accession | YP_003287681 |
Protein GI | 262395828 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.809718 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAAAA TTGACAGGCA ACTGATCAAC TTGATGCAGA AGGATGCAAC CCTGACTACG GCAGAGCTCG CTGACAAAGT AGGATTATCG GCATCACCTT GTGCAAGACG CATTAAGCGT TTAGAGCAGG AGGGCGTAAT TAGCGGTTAT CGAGCCCTTG TGTCCAGAGA CACGGTGGGT ATTGCGATGA CCGTATTTGT TGAAGTCAGT TTGAACAACC ACCAAGCTTC TTCGATTGAT GAATTTGAAC ATGCTGTTGT TGAAATGGAC GAGGTGATCT CGTGCCATGT TGTATCAGGG GCTTATGATT ATTTGTTAGA AGTGGTCAGC AAAGATCTCG CTGGCTATGA AACATTCACT AGAAAGCTAC AACGATTAGA AAACGTAAAA GATATCCATA CGCACTTGGC GATTAGACAA GTGAAAGGAA ATGGAAGCTT GCCGATTTAT GCATAA
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Protein sequence | MDKIDRQLIN LMQKDATLTT AELADKVGLS ASPCARRIKR LEQEGVISGY RALVSRDTVG IAMTVFVEVS LNNHQASSID EFEHAVVEMD EVISCHVVSG AYDYLLEVVS KDLAGYETFT RKLQRLENVK DIHTHLAIRQ VKGNGSLPIY A
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