Gene VEA_000530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000530 
Symbol 
ID8558835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp630315 
End bp630770 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content44% 
IMG OID646408194 
Producttranscriptional regulator 
Protein accessionYP_003287681 
Protein GI262395828 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.809718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAAAA TTGACAGGCA ACTGATCAAC TTGATGCAGA AGGATGCAAC CCTGACTACG 
GCAGAGCTCG CTGACAAAGT AGGATTATCG GCATCACCTT GTGCAAGACG CATTAAGCGT
TTAGAGCAGG AGGGCGTAAT TAGCGGTTAT CGAGCCCTTG TGTCCAGAGA CACGGTGGGT
ATTGCGATGA CCGTATTTGT TGAAGTCAGT TTGAACAACC ACCAAGCTTC TTCGATTGAT
GAATTTGAAC ATGCTGTTGT TGAAATGGAC GAGGTGATCT CGTGCCATGT TGTATCAGGG
GCTTATGATT ATTTGTTAGA AGTGGTCAGC AAAGATCTCG CTGGCTATGA AACATTCACT
AGAAAGCTAC AACGATTAGA AAACGTAAAA GATATCCATA CGCACTTGGC GATTAGACAA
GTGAAAGGAA ATGGAAGCTT GCCGATTTAT GCATAA
 
Protein sequence
MDKIDRQLIN LMQKDATLTT AELADKVGLS ASPCARRIKR LEQEGVISGY RALVSRDTVG 
IAMTVFVEVS LNNHQASSID EFEHAVVEMD EVISCHVVSG AYDYLLEVVS KDLAGYETFT
RKLQRLENVK DIHTHLAIRQ VKGNGSLPIY A