Gene VEA_000520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000520 
Symbol 
ID8558825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp621613 
End bp622353 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content46% 
IMG OID646408184 
Productacetoacetyl-CoA reductase 
Protein accessionYP_003287671 
Protein GI262395818 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01829] acetoacetyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAG TCGCTTTGAT CACCGGATCA AAAGGCGGAA TTGGTTCTGC TATTTCCTCT 
CAATTAGTGA ATGATGGTTA CCGTGTAATC GCTACGTATT TCACAGGCAA CTATGAATGT
GCGTTGGAGT GGTTCAACAG TAAAGGGTTT ACCAAAGATC AGGTTCGCCT TTTTGAGTTG
GACGTAACAA ACACTGCAGA GTGTGCAGCA AAGTTAGCGC AATTGCTTGA GGAAGAAGGG
ACCATTGATG TCGTTATCAA CAACGCAGGT ATCACACGTG ATGGCGTGTT TAAAAAGATG
ACTGCGCAAG CTTGGAATGA CGTCATTAAT ACCAACCTCA ATAGTCTATT CAACGTTACG
CAACCTCTGT TCGCTGCGAT GTGCGAAAAA GGCGGTGGTC GTGTCATTAA CATCTCCTCA
GTCAATGGCC TAAAAGGGCA GTTTGGTCAA GCAAACTACT CGGCGGCGAA AGCTGGGATG
ATAGGTTTCT CTAAAGCCTT GGCGTATGAA GGTGCTCGTT CGGGTGTGAC AGTAAATGTT
ATTGCGCCAG GTTACACTGG TACACCAATG GTTGAGCAAA TGAAGCCAGA AGTATTGGAG
TCCATCACGA ATCAAATCCC AATGAAACGC CTTGCTACAC CAGAAGAAAT TGCAGCATCA
GTGAGCTTCT TGGTCAGCGA TGCAGGGGCC TATATCACCG GTGAGACTTT GTCGGTGAAT
GGCGGCCTAT ACATGCACTA A
 
Protein sequence
MKKVALITGS KGGIGSAISS QLVNDGYRVI ATYFTGNYEC ALEWFNSKGF TKDQVRLFEL 
DVTNTAECAA KLAQLLEEEG TIDVVINNAG ITRDGVFKKM TAQAWNDVIN TNLNSLFNVT
QPLFAAMCEK GGGRVINISS VNGLKGQFGQ ANYSAAKAGM IGFSKALAYE GARSGVTVNV
IAPGYTGTPM VEQMKPEVLE SITNQIPMKR LATPEEIAAS VSFLVSDAGA YITGETLSVN
GGLYMH