| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000513 |
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| Symbol | |
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| ID | 8558818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 614164 |
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| End bp | 616653 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646408177 |
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| Product | periplasmic nitrate reductase precursor |
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| Protein accession | YP_003287664 |
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| Protein GI | 262395811 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01706] periplasmic nitrate reductase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATGA CAAGACGTGC GTTTGTGAAA GCAAACGCGG CTGCATCAGC TGCTGCTGTC
GCAGGTGTGA CACTACCAGC ATCTGCAGCC AACCTGATTG CAAGCTCTGA TCAAACCAAA
ATCACATGGG ACAAAGCACC TTGTCGTTTC TGTGGTACAG GCTGTTCTGT TCTTGTTGGT
ACTCAAAATG GCAAAGTGGT AGCAACACAG GGTGACCCAG AAGCACCAGT AAACAAAGGC
CTAAACTGTA TTAAAGGCTA CTTCCTTTCT AAGATCATGT ACGGTCAAGA CCGTCTGACT
CAGCCGATGC TGAGAATGAA AGATGGCAAA TTCCACAAAG ACGGTGAATT TACACCTATC
TCTTGGGATG ACGCTTTCGA CATCATGGCT GAGAAATGGA AAGCTTCCCT CGAGAAAAAA
GGTCCAACAA GCGTAGGTAT GTTTGGCTCA GGCCAATGGA CAGTAATGGA AGGCTACGCT
GCGTCAAAGC TAATGAAAGC TGGCTTCCGT TCAAACAACA TTGATCCAAA CGCTCGTCAC
TGTATGGCTT CTGCTGTAGT TGGCTTTATG CGCGCATTCG GTATCGATGA GCCGATGGGG
TGTTACGATG ACTTTGAGAA CGCAGACGCA TTCGTTCTAT GGGGCTCGAA CATGGCAGAG
ATGCACCCTG TTCTATGGAC TCGTATTACT GACCGTCGCC TAAGTCACCC TCACGTTAAA
GTGAACGTGC TTTCTACTTA CTACCACCGT TCATTTGAGT TGGCAGATCA CGGCTACATT
TTTAATCCAC AGTCTGACCT AGCGATTGCT AACTTCATCG CGAACTACAT CATCGAAAAC
GATGCGGTAA ACTGGGACTT CGTAAACAAG CACACTAACT TCACTCAAGC AGATACCGAC
ATCGGTTACG GCCTACGTGA CGATGATCCG CTACAAAAAG CAGCGAAGAA TCCTAACTCA
GGCAAGCTAA CGTCTATCTC TTTCGAAGAG TACAAAAAGT CTGTTGCACC TTACACCGCT
GAGAAAGCCT CTGAAATCTC TGGTGTTGAA AAAGAGAAGC TTATCGAGCT TGCGAAGCAA
TACGCCAATC CAAATACAAA AGTAATGTCA CTTTGGACAA TGGGTATGAA CCAACATACT
CGTGGCGTGT GGATGAATAA CTTGGTTTAC AACATCCACC TACTAACCGG TAAGATCTCA
ACTCCAGGTA ACAGCCCATT CTCACTAACG GGTCAACCAT CTGCGTGTGG TACCGCTCGT
GAGGTTGGTA CTTTCGCTCA CCGTCTACCT GCAGACATGG TAGTAGCTAA CCCGAAACAC
CGTAAGATTG CGGAAGACAT CTGGAAACTG CCAGAAGGTA CGATTCCACC AAAACCTGGC
TTCCACGCCG TATTGCAAGA CCGCATGTTG AATGATGGTG TTCTGAACTG TTACTGGGTT
CAATGTAATA ACAACATGCA AGCGGGTCCA AACATCAACA CAGAACGTCT TCCAGGTTAC
CGCAACCCTG AAAACTTCAT CGTTGTGTCT GACCCATACC CAACAGCGAC AGCGCAAGCA
GCAGACCTTA TTCTTCCAAC TGCAATGTGG ATTGAGAAAG AAGGTGCTTA CGGTAACGCA
GAGCGTCGTA CTCAAGCTTG GTACCAACAA GTGGGCACGG TCGGTCAGGC AAAATCTGAC
CTATGGCAGC TAATGGAGTT CTCGAAACGC TTCAAAATGG AAGAAGTGTG GCCTGAAGAG
CTACTAGCGA AAGCGCCTCA GTACCGTGGT AAAACCATGT ACGACGTACT ATACCGCAAT
GGTAATGTCG ACAAGTTCCC TATCGAAGAA GCACGCGAAT TGAATGACGA TGCCCACCAC
TTCGGTTTCT ATGTTCAAAA AGGTCTGTTT GAGGAATACG CAACGTTTGG CCGCGGTCAC
GGGCATGATT TAGCACCATA CGACCGTTAC CATGAAGTGC GTGGTCTACG TTGGCCAGTT
GTTGATGGTA AGGAAACACA ATGGCGCTTT AAAGAAGGTT CTGACCCATA CGCAAAAGAA
GGTTCTGGTT GGGATTTCTA CGGCAATGCT GACGGCAAGG CGAAGATTAT CTCTGCACCA
TATGAAGCGC CACCAGAAGT GCCAAACGAT GAGTTTGATA TGTGGCTATG TACTGGCCGT
GTTCTTGAAC ATTGGCACAC AGGCACCATG ACTCGTCGTG TACCTGAGCT ATACAAAGCA
GTACCAGACG CGGTGTGTTA CATGCACCCT GAAGACGCAA AAGCGCGTAA CGTTCGTCGT
GGTGAAGAAG TACTCATGGC AAACAAACGC GGCGAAGTAC GCGTTCGTGT TGAAACTCGC
GGTCGTAACC GTCCGCCAAA AGGTTTGGTA TTCGTACCGT TCTTTGATGC ACGTATTTTG
ATTAACAAGC TCATCCTAGA TGCGACTGAC CCACTGTCTA AACAGACAGA CTTTAAGAAG
TGTCCAGTCA AAATCACTAA GATTGCTTAA
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| Protein sequence | MKMTRRAFVK ANAAASAAAV AGVTLPASAA NLIASSDQTK ITWDKAPCRF CGTGCSVLVG
TQNGKVVATQ GDPEAPVNKG LNCIKGYFLS KIMYGQDRLT QPMLRMKDGK FHKDGEFTPI
SWDDAFDIMA EKWKASLEKK GPTSVGMFGS GQWTVMEGYA ASKLMKAGFR SNNIDPNARH
CMASAVVGFM RAFGIDEPMG CYDDFENADA FVLWGSNMAE MHPVLWTRIT DRRLSHPHVK
VNVLSTYYHR SFELADHGYI FNPQSDLAIA NFIANYIIEN DAVNWDFVNK HTNFTQADTD
IGYGLRDDDP LQKAAKNPNS GKLTSISFEE YKKSVAPYTA EKASEISGVE KEKLIELAKQ
YANPNTKVMS LWTMGMNQHT RGVWMNNLVY NIHLLTGKIS TPGNSPFSLT GQPSACGTAR
EVGTFAHRLP ADMVVANPKH RKIAEDIWKL PEGTIPPKPG FHAVLQDRML NDGVLNCYWV
QCNNNMQAGP NINTERLPGY RNPENFIVVS DPYPTATAQA ADLILPTAMW IEKEGAYGNA
ERRTQAWYQQ VGTVGQAKSD LWQLMEFSKR FKMEEVWPEE LLAKAPQYRG KTMYDVLYRN
GNVDKFPIEE ARELNDDAHH FGFYVQKGLF EEYATFGRGH GHDLAPYDRY HEVRGLRWPV
VDGKETQWRF KEGSDPYAKE GSGWDFYGNA DGKAKIISAP YEAPPEVPND EFDMWLCTGR
VLEHWHTGTM TRRVPELYKA VPDAVCYMHP EDAKARNVRR GEEVLMANKR GEVRVRVETR
GRNRPPKGLV FVPFFDARIL INKLILDATD PLSKQTDFKK CPVKITKIA
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