Gene VEA_000494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000494 
Symbol 
ID8558799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp590736 
End bp591686 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content46% 
IMG OID646408158 
Producttransaldolase 
Protein accessionYP_003287645 
Protein GI262395792 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00874] transaldolase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.237649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAACA AGTTAGAGCA ACTTCGTAAA CTAACGACTG TAGTAGCAGA CACTGGCGAA 
ATTGATGCAA TCAAAAAGTA TCAACCAGAA GACGCAACAA CTAACCCTTC TCTTATCCTG
AAAGCCGCTC AAATCGCAGA GTACGCACCT CTAATCGATG CTTCAATCGA ATATGCTAAA
GCACAGAGCA ACGATAAAGC TCAACAAGTT CAAGACACTT GTGACATGCT TGCAGTAAAC
ATCGGTAAAG AAATCCTAAA AACTATCCCA GGTCGTATCT CTACAGAAGT TGACGCACGC
CTATCTTACG ATATGGAAGG AAGCGTAGCG AAAGCACGTC AACTAGTAAA AATGTACAAC
GATGCAGGCA TCACTAACGA CCGCATCCTT ATCAAACTAG CGTCTACTTG GGAAGGTATC
CGCGCAGCAG AAATCCTAGA GAAAGAAGGC ATCAACTGTA ACCTAACGCT TCTATTCTCA
TTCGCTCAAG CGCGTGCTTG TGCAGAAGCT GGCGTATTCC TAATCTCTCC ATTCGTTGGC
CGTATTATGG ACTGGTACAA AGCGAAAGAA GGCCGTGACT TCGAAGCTTC AGAAGATCCA
GGCGTACTGT CTGTAACTAA GATCTACAAC TACTACAAAG AGTACGGCTA CAAAACTGTC
GTAATGGGCG CAAGCTTCCG TAACATCGGT GAGATCCTAG AACTAGCTGG CTGTGACCGT
CTAACTATCG CTCCTGCTCT ACTTGCTGAG CTAGAAGCTG CAGAAGGTGA AGTGGTTGAG
AAGCTAGTTG ATTCTAAAGG CGCAGCTGAG CGTCCTGCAC CAATGACTCA TTCTGAGTTC
CTATGGGAAC ACAACCAAGA CCCAATGGCG GTTGAGAAAC TGGCTGAAGG CATCCGCAAC
TTCGCCGTTG ACCAAGGTAA ACTAGAAGCG ATGATCGAAG CTAAGCTTTA A
 
Protein sequence
MSNKLEQLRK LTTVVADTGE IDAIKKYQPE DATTNPSLIL KAAQIAEYAP LIDASIEYAK 
AQSNDKAQQV QDTCDMLAVN IGKEILKTIP GRISTEVDAR LSYDMEGSVA KARQLVKMYN
DAGITNDRIL IKLASTWEGI RAAEILEKEG INCNLTLLFS FAQARACAEA GVFLISPFVG
RIMDWYKAKE GRDFEASEDP GVLSVTKIYN YYKEYGYKTV VMGASFRNIG EILELAGCDR
LTIAPALLAE LEAAEGEVVE KLVDSKGAAE RPAPMTHSEF LWEHNQDPMA VEKLAEGIRN
FAVDQGKLEA MIEAKL